Chryseobacterium indologenes: CEQ15_21600
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Entry
CEQ15_21600 CDS
T04932
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cio
Chryseobacterium indologenes
Brite
KEGG Orthology (KO) [BR:
cio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cio03400
]
CEQ15_21600
DNA repair and recombination proteins [BR:
cio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEQ15_21600
Archaeal homologous recombinant proteins
CEQ15_21600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
DUF5798
Rad50_zn_hook
Motif
Other DBs
NCBI-ProteinID:
ASE63884
LinkDB
All DBs
Position
complement(4803716..4806751)
Genome browser
AA seq
1011 aa
AA seq
DB search
MIPVKLTVEGLYSYQERQIIDFKNLTEGGLFGIFGAVGSGKSSILEAISFVLYGETERLN
MRDKRAYNMMNLKSNNSYIEFDFINFENKQFRATRDFRRNSKKFDDVKPYSVTFYENIDN
KWVPLDHSNAETIIGLSYPNFKRTIIIPQGQFKEFLELGAAERTNMMKEIFSLQRFDLQN
NVSSLNVRNRSELDQLEGRLKGFEEISEEKIQQQKEFLTEEQKKLTQVNERLEQVSNTYQ
QLKNLKTDFESLQQNRENFAELSLQKPMIDALEIKTDLYDRIFRVFNPLIIEKNKLSKEI
KDQQTEKENHVKVVQDTEKKFNAVKEQLIILEPQFKSLDQSRIQENDLNLIVNILKFSEE
IKVLNERTQKGSEKVTEVETKRESNLKKITELTKSLVTLKEQKLDTALLSQIGNWFIQHK
NLQKSLLEQTEKTEKQQKQVHGVAEELKVFPYHKNYQENFRTQKESLESNKKQWVQKLDH
LKIQKELSRFASELQNGESCPLCGSKEHPYIVEFHDVHMEMQETQEKINALDEQLQKLQK
QETEIEKVLDRKKIFEDQLINEQTTLQAIQRDLENHIQLFIWKEFSPAREEEFDKKRQDS
FAVEKKIEEIERNITTEREETDKENKLLEKYKSALETFRLEEATKQEQINISRSGLKTLD
WNLYQQKTVQEVEEAYQKLVQSNKETEQNYQAAVEQEKILAPVLAEQKAVVSQTEKLIMT
LEKEIDNHQKAIAGSLKEHQFADFKEVEHILSQEINIEQSRAQIQKFKIDFQTLKKVIEG
LELKLKNLSFDNEQFSLAEKQYNDVKAEVQQVNDSVVTMTSEIQRLEKEYAKKEQLLKDL
AALQKRAENLKLMVNLFKGAGFVQYVSSIYLRQLCDHANVRFHRMTRNQLSLQLNENNDF
EIIDYLNEGRSRSVKTLSGGQAFQVSLSLALALAESVQANAQADKNFFFIDEGFGTQDTE
SVNIVFETLTNLIKENRIVGIISHVEELKEKIPTALTIIKDEERGSLIGIG
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtaaaattaacagttgaaggtttatattcttaccaggaacgccagattatt
gattttaaaaatcttacggaaggcggtttattcggtattttcggggcggtaggttccgga
aagtcttcgattcttgaagccatctcattcgtgttatacggcgaaacggaacgtctgaat
atgcgtgataagagggcgtacaacatgatgaatttaaaatcaaacaattcttatatcgaa
tttgatttcatcaattttgaaaataaacagtttcgtgcaaccagggatttcagacgtaat
tccaagaaatttgacgatgtaaagccttattccgtcactttttatgaaaatattgataac
aaatgggttccgctggatcattccaatgcggagacgatcattgggctaagttatcctaat
ttcaagcgaaccattatcattccacaaggtcagtttaaagagtttcttgaacttggtgct
gcagaaagaacaaatatgatgaaggagatcttcagtcttcagagatttgatctccagaat
aatgtttcttccctgaacgtcagaaacaggtccgaactggatcagcttgaaggacggctg
aaaggttttgaagaaatcagtgaagaaaagattcagcagcaaaaggaatttttaacagag
gaacagaaaaaactcactcaggtcaatgagagactggaacaggtatccaatacttatcaa
cagctaaagaatttaaaaaccgactttgaaagcctgcaacagaacagagaaaatttcgct
gagctctctctccaaaaacccatgattgatgcgctggaaattaagaccgatctgtacgac
cgcattttcagggtttttaatcctttgattattgaaaaaaacaagctttcaaaagaaata
aaagatcagcagacggaaaaagaaaaccatgtgaaggttgtacaggacactgaaaaaaag
ttcaatgctgtcaaagagcaactgattattcttgagccccaatttaaatctttggatcaa
tccagaatacaggaaaacgatctgaatctaattgtcaatattctcaaattttctgaagag
atcaaagtactcaatgagcgtacgcagaagggttcagaaaaagtaacggaagtagagaca
aaaagagaaagcaaccttaaaaagattacagaacttaccaaaagtctggtgactttaaaa
gagcaaaagcttgacaccgctcttctttctcaaattggcaactggtttattcaacataaa
aatttacaaaaatccctgcttgagcaaacggaaaaaactgaaaaacaacagaaacaggtt
catggcgtcgctgaagaattaaaggtttttccttaccacaaaaattatcaggaaaatttc
agaacgcagaaagaaagtcttgaaagtaacaaaaaacaatgggttcagaagctagaccat
ttaaaaatacaaaaagaactatcccgttttgccagtgaacttcaaaacggagaatcctgt
cctctttgtggttctaaggaacatccctatattgtggaatttcacgatgtacatatggaa
atgcaggaaacccaggaaaagataaatgctcttgatgagcagcttcagaaacttcagaaa
caggaaacggaaatcgaaaaagttcttgacagaaaaaagatttttgaagatcagcttatc
aacgaacaaacgacgttacaagccattcaaagagatctggagaatcatattcagcttttt
atctggaaagagttcagccctgcacgtgaggaagaatttgataaaaaacgccaggattct
tttgccgtagaaaaaaagatagaagaaatagaacggaacattaccacggaacgtgaggaa
accgacaaagaaaacaagctcttagaaaaatataaatcggcgctggaaaccttcagactg
gaagaagcgacgaaacaggaacagattaacataagccgctcgggacttaaaactctggac
tggaatctttaccagcaaaaaacggttcaggaagttgaagaagcttatcagaagttggtt
caaagcaataaagaaaccgaacagaattatcaggcagccgttgaacaggaaaaaatattg
gctcccgtgctggcagaacaaaaagccgttgttagtcagactgaaaaactgatcatgacg
cttgaaaaagagatcgataatcatcagaaggctatagccggctctttaaaggagcatcaa
ttcgcagatttcaaagaagttgaacatattctttctcaggaaatcaatattgagcagtca
agagctcagatccagaagttcaaaatcgatttccaaaccctgaaaaaagtgattgaagga
ttggaactcaaactcaaaaatctttcttttgacaatgaacagttttccttggcagaaaag
caatataatgacgtgaaagctgaagttcagcaggtcaatgattctgtcgttacaatgacg
tctgaaattcagcgtctggaaaaagaatatgctaaaaaagaacaacttttaaaagatctt
gcagctcttcagaaacgtgctgaaaatttaaaactgatggtcaatcttttcaaaggagcc
ggttttgtacaatacgtttcttctatttatctgaggcagctctgtgaccatgctaatgtg
cgttttcacagaatgacccggaaccagctgagtctgcaacttaatgaaaataatgatttc
gaaatcatcgattacctcaacgaaggccgcagcagaagtgtaaagaccctatcgggaggt
caggcattccaggtatcactgagccttgcactggcattggcagaaagtgtacaggcgaat
gcacaggcagacaagaatttcttttttatcgatgaaggtttcgggacgcaggatacggag
tctgtcaatattgtatttgaaacccttaccaatctgatcaaagaaaacagaatcgtggga
atcatctcgcacgtggaagagcttaaagaaaaaattcctacagcgcttaccattattaaa
gatgaagaaagaggtagtttgatcggaattggctaa
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