Candidatus Cytomitobacter indipagum: FZC35_00530
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Entry
FZC35_00530 CDS
T10104
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cip Candidatus Cytomitobacter indipagum
Pathway
cip03030
DNA replication
cip03430
Mismatch repair
cip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FZC35_00530 (dnaE)
03430 Mismatch repair
FZC35_00530 (dnaE)
03440 Homologous recombination
FZC35_00530 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cip03032
]
FZC35_00530 (dnaE)
03400 DNA repair and recombination proteins [BR:
cip03400
]
FZC35_00530 (dnaE)
Enzymes [BR:
cip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FZC35_00530 (dnaE)
DNA replication proteins [BR:
cip03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FZC35_00530 (dnaE)
DNA repair and recombination proteins [BR:
cip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FZC35_00530 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
QEK37871
UniProt:
A0A5C0UDQ0
LinkDB
All DBs
Position
complement(120719..123859)
Genome browser
AA seq
1046 aa
AA seq
DB search
MMSSYIPLGIRTSYSLLQSTIRMSELNQQTQFESIGIVDDHNLFGAMDYNETLINGEIKP
ITGCELNLEEKYKILVYCKNENGYRNLCKIISKSYGEKVTSVFWSDFKDAKDIMAIAIPG
YTCETGQEKQCADNMDKYFANNWAVGIRNRNTEEQEACYMSSIHSTPIVAIPEIRCITKE
QNQAYQALNCIKHGQYFDEDTSYEFQLPTSDEMTEMYKNWKAPLENTFEFAKKCSFLLKK
RKPELPHFATENMTEKELLNKKAYDGLKEKVKSDNMGKYEQRLEFELEVINKMGFDGYFL
IVADFINWSKQNDIPVGPGRGSGAGSLTAYCVGITEIDPMQFGLVFERFLNPGRISMPDF
DVDFCPKGRGKVVDYIISKYGIDKVAHIITFGSLQSKGVLRDVGRILQVPYGLVDRYSKS
IPVIQGANLSLEKYMEKNDDLTKEMEEDEKVKKMFELSLQIEGLPRHASIHAAGIVIGKE
ALYDILPLYRENNLTVTQFSLNHIEDAGLVKFDLLGLTALTIINDAANLAKKANPNFDIN
AIPLNDQKTLDIFRDGHTVGIFQFESKGMTETVVGLGPETFEDLIAVISLYRPGPMENIP
TFIKRKHGLLPIQYLFPEMERILKPTYGILVYQEQVLEIARSLAGYSMQEADLLRRAIGK
KKPEEMKKLKIDFTKRICEKMNSEEDKAIELFEQIESFAKYAFVKAHATPYALIGYQAGY
LKAHYAIELLVSSMILEQNNTDKLAEFIYEGRRLKINILSPDINKSSESFSIENGNIRFG
LNAIKNVGIHCINDIISKKPFATIEDFFNRANVNKKTLENLIKSGAFDSLEKNRALVWSK
KDKNNSIPTLFTEQIEITDWNNDTKLSNEHEALGIYLTEHPLDKFAINKFHMKWISIRPS
AEESISGVGKLEKIISKKSPRGDTYSICIVSDPFGIWRFISREKPDVLSKFVGSKIHING
EDKAKFIIANNVVHLDDFINSDGQIVFKIQDQEEIKNLHQILEPHMDKNGKMQIMLNFEN
ENPIIVGKINLSENLLKKLDKFNWKI
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctagttacatacctttaggaattcgaacttcatattccctgcttcaaagcaca
ataagaatgtctgaattaaatcaacaaacacaatttgaatcgattggaatagtagatgat
cacaatctgtttggagccatggattataatgaaactctaataaatggggaaataaaacca
atcacaggatgtgaattaaatcttgaagaaaaatacaaaatacttgtgtattgcaaaaat
gaaaatggatacagaaatttatgcaagattataagtaaaagctatggagaaaaagtaaca
tctgttttttggtcagattttaaagatgcaaaagatatcatggcaattgcaattcctgga
tatacttgtgaaactggacaagaaaaacagtgcgcagataatatggataaatattttgca
aataattgggctgttggaataagaaatagaaatacagaagagcaagaagcttgctatatg
tccagcattcacagcactcctatagttgcaattcctgaaattagatgcataactaaagag
caaaaccaagcttatcaagctttaaattgtataaagcatgggcaatattttgatgaagat
actagctatgaatttcaattgccaacttctgatgagatgactgagatgtataaaaattgg
aaagctcctcttgaaaatacatttgaatttgctaaaaaatgctcttttttgctgaaaaaa
agaaagcctgaattgcctcattttgcaacagaaaatatgacagaaaaagagcttttaaat
aaaaaagcatatgatggattaaaagaaaaagtaaaatcagataatatggggaaatatgaa
caaagactagaatttgaattagaagtaattaataaaatgggattcgatggttactttctc
attgttgcagattttataaactggtcaaagcaaaatgatattccagttgggcctggtaga
ggatctggagctgggtcattaactgcatattgtgtgggaattacagaaattgatccaatg
caattcggacttgtattcgagcgttttttaaacccaggaagaattagcatgcctgacttt
gatgtggatttttgccctaaaggaagaggcaaagttgttgattatataatttcaaaatac
ggaatagataaagttgctcatataattacattcggatcccttcaatcaaaaggtgtgttg
agagatgttggtagaattcttcaagttccatatgggctggtagacagatattccaaatca
attccagtaattcaaggtgctaatcttagtttagaaaaatatatggaaaaaaatgatgac
ctcactaaagagatggaggaagatgaaaaagttaagaaaatgtttgagcttagcctgcaa
atagaaggattgcccagacatgcatcgatacatgctgcaggaattgttataggaaaagaa
gctttgtatgatattcttcctttatacagagaaaacaatttaacagtaactcagttctca
ttaaatcacattgaggatgctggattggtaaagtttgatttacttggattaactgcgcta
actattataaatgatgctgctaacttagcaaaaaaagcaaatccaaattttgatataaat
gctataccacttaatgatcaaaaaactctagatatatttagagatggacacactgttgga
attttccagtttgaaagcaaaggaatgacagaaactgttgttggcttaggccctgagaca
tttgaagacttaattgctgttatatctttatatagacctggacctatggaaaacattcct
acttttattaaaagaaaacatggattgcttccaattcagtatttgtttccagaaatggaa
agaatacttaagcctacatatggaattctggtttatcaggagcaggttttggaaattgcc
agaagtttagctggatactcaatgcaggaagctgatttgctaagaagagcaataggaaaa
aagaagcctgaagagatgaaaaagctcaaaattgatttcactaaaagaatatgcgaaaaa
atgaattccgaggaggacaaggctatagagctatttgaacaaattgaaagctttgctaaa
tatgcttttgttaaagcgcatgcgactccatatgcccttattggatatcaagcaggatat
ttaaaagctcattatgcaattgagcttctggtatcatctatgattttagaacaaaacaat
actgataaactggcagaatttatttatgaaggacgtagattaaaaattaacattctatct
cctgacatcaataaatctagcgaatcgttctcaatagaaaatggaaatatcagatttgga
ttaaatgcaattaaaaatgttggaattcattgcataaatgacataatttctaaaaaacca
tttgctactattgaagacttttttaatagagccaatgtaaataaaaaaacattagaaaat
cttattaaatctggagcatttgattctttagaaaaaaatagagcattagtatggagcaag
aaagataaaaataactctattcctactctattcactgagcaaattgaaataacagactgg
aacaatgacacaaagctaagcaatgaacatgaggcattaggaatttatcttacagagcac
cctcttgataaatttgcaataaataaatttcacatgaaatggatttcaattcgaccaagc
gctgaagaatctatttctggagtaggaaaattagaaaaaataattagcaaaaaaagccca
agaggagacacatactctatatgcatagtatctgatccatttggaatatggcgcttcata
tccagagaaaagcctgatgtattaagtaaattcgttggatcaaagatacacataaacgga
gaagataaagcaaaattcataattgcaaataatgttgttcatttggatgatttcatcaac
tcagatggtcaaatagtgtttaaaattcaagatcaggaagaaatcaaaaatttacatcaa
attcttgagcctcatatggacaaaaatggaaaaatgcaaatcatgcttaactttgaaaat
gaaaatccaattatagttggtaaaattaatttatctgagaatttacttaagaagttagat
aaatttaattggaaaatttaa
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