Candidatus Cytomitobacter indipagum: FZC35_01040
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Entry
FZC35_01040 CDS
T10104
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
cip Candidatus Cytomitobacter indipagum
Pathway
cip00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cip00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FZC35_01040 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cip01007
]
FZC35_01040 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cip03016
]
FZC35_01040 (aspS)
03029 Mitochondrial biogenesis [BR:
cip03029
]
FZC35_01040 (aspS)
Enzymes [BR:
cip01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
FZC35_01040 (aspS)
Amino acid related enzymes [BR:
cip01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FZC35_01040 (aspS)
Transfer RNA biogenesis [BR:
cip03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FZC35_01040 (aspS)
Prokaryotic type
Other AARSs
FZC35_01040 (aspS)
Mitochondrial biogenesis [BR:
cip03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FZC35_01040 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA_anti-like
HROB
Motif
Other DBs
NCBI-ProteinID:
QEK37964
UniProt:
A0A5C0UFZ5
LinkDB
All DBs
Position
251357..253099
Genome browser
AA seq
580 aa
AA seq
DB search
MSKKQYRSNYCMDLNSDYIDKEVKLAGWIRKKRDHGNMIFIDLKDHTGVVQCVIDTKNEN
FENINQLSVESVISLEGKVIARPSDSINDGLESGKVEIDIKKITILSKAQTLPFAMHQDD
LGEELRLKYRFLDLRRDEMQYRLKLRSDVIKEIREIMEEKGFMEVHTPILTSSSPEGARD
YVVPSRLNPGKFYALPQAPQQFKQLLMVSGVSKYYQIAPCFRDEDTRADRAPGAFYQLDM
EMAFATQEEVFEVIEDVMFSVFSKFRSDMEISNKPFVKIPYKEAILKYGSDKPDLRIPFH
YHDITHLFAENCPKIFKSIVEGGGKILMLPVKGLSNQTRKFFDSMQKFAQDHGAFGLGYM
LVGEGKSGPLAKILSDEVSNVVREKADGAFFIADYEVNLPKYAGPVLKKVAEEMNLINKD
KYEFCWIIDYPMYEINEGKWDFSHNPFSMPQGEMNAFEKDPGEIMAYQYDLVCNGIELTS
GAIRNHDPEIMYKAFEVAGYSKEDVDREFGAMINAFKYGAPPHGGSAPGIDRMIMLLADT
ENIREIIPFPLNQQGQDLMMNAPCEISNKHLKELGIKIEE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaaacaatacagaagcaattattgcatggacttaaattcagactatatagac
aaagaagttaaattagcaggatggattagaaagaaaagagatcatggaaatatgattttc
atagatttgaaagatcatactggggttgttcaatgtgtcattgatacaaaaaatgaaaac
tttgaaaacattaatcagctgtctgttgaaagtgttatttctttagaaggaaaagttatt
gcaaggccaagcgactctataaatgatggattagagtcaggaaaggtggagattgatatt
aaaaaaataaccattttatctaaagctcaaacattgccttttgctatgcatcaagatgat
ttaggggaagaattgagattgaaatacagattcttagatcttagaagagatgagatgcaa
tatagattaaagttgagatcagatgttatcaaggaaataagagaaattatggaagaaaaa
ggattcatggaagttcatactccaattctaacttcaagttcccctgaaggtgcgagagat
tatgttgttccaagtagattgaatccagggaagttttatgctttacctcaagctccacaa
caatttaagcaattgctgatggtttctggggttagcaagtattatcaaatagctccttgc
tttagagatgaagacacaagagcggatagagctcctggggctttttatcagctagatatg
gaaatggcatttgcaactcaagaggaagtttttgaagttattgaagatgtgatgttttct
gtgttttctaaatttagatcagatatggagatttccaataagccatttgtaaaaattcct
tacaaagaagcgattttaaaatatggaagcgataagcctgatttgagaattccatttcat
tatcatgatattactcatttgtttgctgagaattgtccaaaaatatttaaatctattgtg
gagggagggggtaaaattttgatgcttcctgtgaaaggtttgagcaatcaaacgaggaaa
ttctttgatagcatgcagaaatttgctcaggatcatggggcatttggtttaggttatatg
cttgttggggaagggaaaagcggccctttagcgaagatattatctgatgaagtttccaat
gttgttagagaaaaagcagatggagcattttttattgctgattatgaagttaatttgccc
aaatatgctggacctgtattgaaaaaagtagcagaagaaatgaatttgataaacaaagat
aaatacgaattttgttggattattgattatcctatgtatgaaataaatgaaggaaaatgg
gatttttcacataatccattttctatgcctcaaggagaaatgaatgcatttgaaaaggac
cctggagaaattatggcctatcaatatgatttagtttgcaatggaattgaattaaccagt
ggcgcgattaggaatcatgatccagaaattatgtacaaagcatttgaagttgcaggatat
tcaaaagaagatgttgatagagagtttggcgcaatgattaacgcatttaaatatggagct
cctccacatggtggatctgcgccaggaattgatagaatgataatgctgttagctgatact
gaaaatattagagaaattataccttttccactaaatcaacaaggtcaagatttaatgatg
aatgcaccttgtgagatttcaaacaaacatcttaaagagcttggaattaaaatagaagaa
taa
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