Candidatus Cytomitobacter indipagum: FZC35_01210
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Entry
FZC35_01210 CDS
T10104
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cip Candidatus Cytomitobacter indipagum
Pathway
cip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FZC35_01210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cip03021
]
FZC35_01210
03019 Messenger RNA biogenesis [BR:
cip03019
]
FZC35_01210
Transcription machinery [BR:
cip03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FZC35_01210
Messenger RNA biogenesis [BR:
cip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FZC35_01210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
NACHT
AAA
Spore_III_AA
ATPase_2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QEK38299
UniProt:
A0A5C0UEU8
LinkDB
All DBs
Position
complement(301780..303024)
Genome browser
AA seq
414 aa
AA seq
DB search
MDLCKLRERKNTELVRIAESLNLNLDEIKNKDLLLEILKEYSVLGNDIKAEGTLEVINDG
YGFIRFASEDYTFSDDDIHVHQQFISRFNLKPGDSLEVNIKIPENNKNYSVKRIISINSK
PAKRILGRLSFESLTALYPDRKMKLETEDRKNLSLRTLDCITPIGFGQRALIVAPPRTGK
TILLQDIANAIHQNHKDVELMVLLIGERPEEVTDMKRSVHGEVISSTFDEPATRHVKVSE
VVIEKAKRMVEDGKDVVILMDSITRLARAYNNVIPSSGKVLTGGVDAHALQYPKKFFGAA
RNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNADIILDRKAADKRIFPALDILKSG
TRKEELLRNEGELSKIWLIRRIISEMNTVEALEFLLDKIHNSKDNDHFFRMMNS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atagacttatgcaaattgagagaaagaaaaaatactgaattagtaagaattgctgaatct
cttaatttgaacttagatgaaataaaaaataaagatttattgctagaaatattaaaagag
tattctgttcttggaaatgacattaaagctgaaggaactcttgaagttataaatgatggg
tatggatttataaggtttgcatcagaagattatactttttctgatgatgacatacatgtt
catcaacaatttatctctagattcaacttaaaacctggagattcacttgaagttaatatc
aaaattccagaaaacaacaaaaattattctgtaaaaagaataatttctattaatagcaaa
cctgctaaacgcatattaggaaggctgtcatttgagtctttaactgctttatatccagat
agaaaaatgaaacttgaaactgaagatagaaaaaatcttagcttaagaactttagactgt
ataaccccaattggatttggtcaaagagctcttattgtagcgcctccaagaactggaaaa
acaattttattgcaagatatcgcaaatgcaattcatcaaaaccataaagatgtagagttg
atggtgctgttaattggagaaagaccagaagaagtcactgacatgaaaagatcggttcat
ggagaagtaattagctcaacatttgatgagccagcaacaagacatgttaaggtttctgaa
gttgtgatagaaaaagccaaaaggatggttgaggatgggaaggatgtcgtaattttgatg
gattccattactcgtttagctagagcctacaataatgttatcccctcttctggtaaagtt
ttaactggtggagttgatgcccatgctttacaatatccaaaaaaattctttggagcagct
agaaatattgaagaaggtgggtcattaacgattatcgctactgcattagtggacactgga
tctagaatggatgaagttatatttgaagaattcaaaggaactggtaatgcagatataata
ttagacagaaaagcagcagacaaaagaatcttcccagcattggatatacttaagtcagga
acaagaaaagaagaattgctgagaaatgaaggggaattgtcaaaaatttggctaatcaga
agaattatttcagaaatgaatacagttgaagctttggaattcttattggataagatccat
aatagcaaagataatgatcatttctttagaatgatgaatagttaa
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