KEGG   Candidatus Cytomitobacter indipagum: FZC35_01685
Entry
FZC35_01685       CDS       T10104                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
cip  Candidatus Cytomitobacter indipagum
Brite
KEGG Orthology (KO) [BR:cip00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cip02044]
    FZC35_01685 (tssC)
Secretion system [BR:cip02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FZC35_01685 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 T6SS_VipA Gp23
Other DBs
NCBI-ProteinID: QEK38081
UniProt: A0A5C0UEI1
LinkDB
Position
complement(397023..399014)
AA seq 663 aa
MEQSIQKLLLRIRPPRVRITYDVETGGAVQSKELPFVLGVISDLYGHQEDRVNFKERKFV
YIDRDNFSHVMQSIKPKLNISINNVLDVKEDKSNKKKGSSSEMLALELMFETMDDFNPIS
IVKGIPQLNEILLDHEMLIDLSAKLDSNNILHDILSKAVADKGLLAKLVSESKDSTKSCP
EMDKIIKESGLYTDSSADEKNADKNSESMIRYRKMIASLCKNASEITGETSLYPYIMDVI
TKIDEKISLQLDEILHNVEFQKLEASWRGVHYVVMNSETGENLKIRLFAATRDEVQSDLD
NASEFDQSTLFKRIYEEEFGTLGGSPYSSLVADFYIGRKPIDVAFVRKLSQVAAAAHCPL
LAAAAPDMFDLKSYNELHVPRDLKKIFESSELAAWNSFRDTEDSRYINLFLPRVLVRLPY
GQNTIPVKEFDYNESVDGMDNSKFCWGNPAFAMALRITTAYSKYGWTAAIRGIEGGGLVE
DLPAYTFKTSYGDIALKCPTEVMITDRREKELSDLGFISLCHNKGTDKAVFFSAQSTQRP
KEYDLPSATSNAALSARLTYMLNVSRFAHYIKMLMRDKIGSFESKDDIQLYLNNWIARYV
FLSDQGDQDVKAKYPLREADIEVVADEENPGAYKAVIFLKPHFQLEELEVSLRLVASLPG
QEG
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggagcaaagcatacaaaaattattgttaagaattaggcctcctagagtccgtataacc
tatgacgtcgaaacaggaggagcagttcaatctaaagagcttccttttgtattaggtgtt
atttctgatttatatggtcatcaagaggatcgcgtaaattttaaagaaaggaaatttgtt
tacatcgacagggataatttttctcatgtcatgcaatcaattaagcctaaactgaacatt
tctattaataatgttctagatgtcaaagaagataaatctaataaaaagaagggctcttct
agtgaaatgttagctcttgagctgatgtttgaaactatggatgattttaatccaattagt
attgttaagggaatccctcaattgaatgaaatattgttagatcatgaaatgttgattgat
ttatcagctaaattagattcaaataatattttacatgatattttatctaaagcagttgct
gacaaaggattgcttgctaaattggtttcagaatcaaaagattcaactaaatcatgccct
gagatggataaaattatcaaagaaagtggattatatacagatagttctgctgatgaaaag
aatgcagataagaattctgagtctatgattagatatagaaaaatgatcgcttctttgtgc
aaaaatgcatctgaaattactggggaaactagtttatacccttacataatggatgtaatc
acaaaaattgatgagaagatttcattgcaattggatgaaattttgcataatgtagaattt
caaaaattagaagcatcttggagaggggttcattacgttgttatgaattctgaaacagga
gaaaatttgaaaattagattgtttgctgcaacaagagatgaagttcagagtgatttggat
aatgcttcagagtttgaccaaagcacattatttaagagaatttatgaagaagagtttgga
accttaggtggatctccatattcttctttagttgctgatttttatatcggaagaaagcca
attgatgttgcatttgtaagaaaattgagccaagttgcagcagcagcacattgtcctttg
ttggcagcagcagcgccagatatgtttgatcttaaatcttataacgaactacatgtccca
agagatttgaagaaaattttcgaaagctctgaattggctgcatggaatagctttagagac
acagaagactctagatacataaacttgtttttaccaagagttttggttagattgccttat
ggtcaaaatactattcctgtcaaagaatttgattacaatgaatcagttgatggaatggat
aactctaaattctgttggggaaaccccgcattcgcaatggcattaagaatcacaactgca
tattcaaaatatggttggacagctgctattcgtggtattgaaggtggtggattggttgaa
gatctaccagcttacacattcaaaacttcatatggtgatattgcattgaaatgtcctaca
gaagttatgattacagatagaagagaaaaagaattaagtgatcttggatttatttctcta
tgccacaataaaggcacggataaagctgtgttcttcagtgcgcaaagtacgcaaaggcct
aaggagtatgatcttccttcagcaacatcaaatgctgcgctatctgctagattaacatat
atgttgaatgtttctagatttgctcattacattaaaatgttgatgagagataaaattgga
tcttttgaatccaaagatgacattcagttgtatttgaataattggattgcacgttacgtt
ttcttatcagatcaaggtgatcaagatgtaaaagcaaaatatccattgagagaagctgat
attgaagttgtggctgatgaagaaaatccaggcgcatacaaggcagtaatatttttgaaa
cctcatttccagttggaagaactagaagtttcattgagattggtagctagtctaccagga
caggaaggttaa

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