Candidatus Cytomitobacter indipagum: FZC35_01985
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Entry
FZC35_01985 CDS
T10104
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cip Candidatus Cytomitobacter indipagum
Brite
KEGG Orthology (KO) [BR:
cip00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FZC35_01985 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cip03021
]
FZC35_01985 (rpoD)
Transcription machinery [BR:
cip03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FZC35_01985 (rpoD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_ner
CoV_NSP15_C
DUF3391
Motif
Other DBs
NCBI-ProteinID:
QEK38134
UniProt:
A0A5C0UGH6
LinkDB
All DBs
Position
459454..461184
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AA seq
576 aa
AA seq
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MEKTMEQTIDNDFFLNNDNEDKKVEVKPNPEEELIFDGLKTSKGAVNDDPVRMYLREMGN
VPLLSREEEVEVAKKIEEGSDLMIRAVCESTITIKRILEWYEAIKSKNMHPSELIDAEET
SSEECFETTDGTTDKSAEDTDKSAAKTADKPVAKTAEKSASTKSATASNEEEEEDEAYDL
KSLEKNMQNLQKVHGKFAKAQNKRFQCIKEGKEVDKKIIQEYDKFHQELVDCIISLRISY
SCIDKLIHEMYALNKEIIKLEINLIKLAEKQGIKRNIFVAHMNKTPIEHAKVKEFFEKND
GFINENEMKMKCITNHIDLPLQEFKRIIKNLRKGEKVMSKNKNIMVSANLRLVISIAKKY
TNRGLQFLDLIQEGNIGLMKAVDKFEYSRGYKFSTYATWWIRQAITRAIADQARTIRIPV
HMIETINRVVKASRQLMHENGKEPTAEEIGEYLAIPVERVRRVQKISKEPVSLELPVGSS
EDGQLVDFIEDQNAASPTDAMLQASIKNAISKAFSHLTSREETLVRMRFGVGTKSDHTLE
EVGEKFKVTRERIRQIEAKAIRKLFSSKTLRSLYNN
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaacaatggaacaaacaattgataatgatttttttctaaacaatgataatgag
gataaaaaagtagaagttaagcccaatccagaagaagagctgatttttgacggattaaaa
acaagcaaaggcgcggtaaatgatgatcctgtaagaatgtatttgcgagaaatgggaaat
gttcctcttttatcaagagaagaagaagtagaagttgcaaagaaaatagaagaaggaagc
gatcttatgatacgcgctgtatgcgaaagcactatcactattaaaagaattttagagtgg
tatgaagctataaaatcaaaaaacatgcacccatctgagttaattgatgcagaagaaaca
agcagtgaagaatgctttgaaactacagatggcactacagataaatctgctgaagataca
gataaatctgctgctaaaactgcagataaacctgttgctaaaactgcagaaaaatctgct
tcaactaaatcagctacagcatctaatgaggaagaggaagaggacgaagcatatgaccta
aagtctctagaaaaaaatatgcaaaatcttcaaaaagtgcatggaaaatttgctaaagct
caaaacaaaagatttcaatgcattaaagaaggaaaagaagtagataaaaaaataatacaa
gaatatgataaatttcaccaagaattggtagattgcatcattagtttgagaattagttac
tcatgcatagataaattaattcatgaaatgtatgcactgaacaaagaaataataaagcta
gaaattaacttaattaagcttgcagaaaaacaaggaataaagagaaatatatttgtggct
catatgaataaaactcctattgagcatgcgaaagttaaagaattttttgaaaaaaatgat
ggatttataaatgaaaatgaaatgaaaatgaaatgcattactaatcatattgatttgcca
ttgcaagaatttaagaggataattaaaaatcttagaaaaggcgaaaaagtcatgtctaag
aataaaaacatcatggtttcagccaatcttagacttgtaatttcaatagctaagaaatac
acaaacagaggattgcagtttcttgatttaattcaagagggaaatattggtcttatgaaa
gctgttgataaatttgaatacagcagaggatataaattctctacatatgctacttggtgg
atcagacaggcaattactagagcaatagcagatcaagcaagaacaattcgtattccagtt
cacatgattgaaacaattaatagagttgtaaaggcttcaagacagctaatgcatgaaaat
ggaaaagagccaactgcagaagaaattggagaatatttggctattcctgtagagcgagta
aggcgtgtgcaaaaaatatccaaagaacctgtaagtcttgaattgccagttggaagcagt
gaagatggacagttagttgattttattgaagatcaaaatgctgcatctcctactgatgcc
atgttgcaagcaagtatcaaaaatgctatttcaaaagcattctctcatctaacaagtcgt
gaagaaacattagtcagaatgaggtttggagtaggaactaagagtgatcatactttggaa
gaagttggagaaaaattcaaagttactagagagagaatcagacaaatcgaagcaaaagcg
atcagaaaactattcagctccaaaacattacgatcactatataacaattaa
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