Candidatus Cytomitobacter indipagum: FZC35_02245
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Entry
FZC35_02245 CDS
T10104
Name
(GenBank) hypothetical protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cip Candidatus Cytomitobacter indipagum
Pathway
cip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FZC35_02245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cip03019
]
FZC35_02245
03016 Transfer RNA biogenesis [BR:
cip03016
]
FZC35_02245
Enzymes [BR:
cip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FZC35_02245
Messenger RNA biogenesis [BR:
cip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FZC35_02245
Transfer RNA biogenesis [BR:
cip03016
]
Prokaryotic type
tRNA degradation factors
FZC35_02245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
KH_1
RNase_PH_C
KH_Vigilin
KH_PARP14_6
Motif
Other DBs
NCBI-ProteinID:
QEK38181
UniProt:
A0A5C0UER6
LinkDB
All DBs
Position
complement(518092..520266)
Genome browser
AA seq
724 aa
AA seq
DB search
MSSYIIGGSPISLRNDIIRPNSDGSVLIQHGKTSILCTVCIGNWENQADYLPLQVIYQER
AYASGKIPGGFLRREGKSDKESIISRMIDRSIRSSVDSSYRFNMQVICTVLSHDNQYCSD
MLSIIGSSVAMQLAGIPCVPICGYKMSWNGEKWSFGTSKDRKHALTFAKSANGIVMFDSY
GKPVKRSVISEGINSAQQDINSILQMCSNFVSDKKSEVKAAPLVERKNICIDTSALLEKM
KKNESISSEKEDFISKWENESVGKEKWNQIIRSIARNYLVWSGKRFDGRGLQDLRKMQFE
TSILNGANGSGLYSKENTQVLASVTFGENEDSQIIESLDGNYKDRFIFHYMFDPYSCGDI
RKVCVSRRDIGHGNLAKRSIRQIAENKKVCRVVADVMSSDGSSSMGSVCASYLAMRDADI
NIEPVAGISVGMIAEGYKHYLLMDINAQEDAWGDMDFKIAGTKNGITSIQMDIKVPYINM
NMFEDAMLLGMKGISQIIDMYPENLKNYQRDDSSRQSQQNKSDNKKSYAKKDERALERDK
LNNNSDDQKSEKKNRKSKILENNATQLDKIIPSDNDSSPKKDAKKKGKINLDIPSDGVIK
FRLDSEIIPSLIGRKGVVINDVSESSGAQIDIGKQDNSISISGKRESIQIALSRVFQIMK
GDEKITFGQVFELTDNKIKIITFDGERKNVPWDGASDIKVGDFIKVTVGRFGHLKEVIDN
ISLQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtctagttatattattggaggatctcctataagtctaagaaatgatattattagacca
aatagcgatgggtctgttcttattcaacatggaaaaacttcaattctttgtactgtatgt
atagggaattgggaaaatcaagcggattatttgcctttgcaagttatttatcaagaaaga
gcttatgcttctggaaaaattcctggaggatttttaagaagagaaggaaaaagcgataaa
gaatctataatttcacgtatgatagatagatctataaggtcttctgttgatagttcttac
agatttaatatgcaagttatttgcacagttcttagtcatgacaatcaatattgctctgac
atgttatcaattattggaagctctgttgctatgcaattagctggaattccatgcgtgcca
atttgtggttataaaatgagttggaatggtgagaagtggagttttggaacttctaaggac
agaaagcatgctttaacatttgctaaatctgcaaatggaatagttatgtttgattcatat
ggaaagccggttaaaagaagtgtgatttctgaagggattaattctgctcaacaagatatt
aatagtattttgcaaatgtgtagcaattttgtttctgacaaaaaatctgaagtcaaggcc
gctcctttagtagagagaaaaaatatttgcatagatacatctgctttgcttgagaaaatg
aagaagaatgaaagtattagcagtgaaaaagaagattttatttctaaatgggaaaacgaa
tcagttggaaaagaaaaatggaatcaaattattagatctatagcgagaaattatttggtt
tggtctggaaaaagatttgatgggagagggttgcaagatttaagaaaaatgcaatttgaa
acatcaattttaaatggagccaatggaagtggattatattctaaagaaaatacccaagtc
cttgcttctgtgacttttggagaaaatgaagattcgcaaataatagagtccttggatgga
aattataaggatagatttatatttcactatatgtttgatccatattcatgcggagatata
agaaaagtttgcgtttctagaagagatataggtcatggaaacttggcaaaaagatcaata
agacaaatagcagagaataaaaaagtttgcagagttgtggctgatgtgatgagctctgat
ggatcttcctcaatgggaagtgtgtgtgcttcctatttggctatgcgtgatgctgatatt
aatatagagcctgtagctggaatttctgttggaatgattgctgaaggatacaagcattat
cttttgatggatataaatgctcaagaagacgcttggggagatatggatttcaaaatagct
ggaacaaaaaatggaataacttctatacagatggatataaaagttccatatattaatatg
aatatgtttgaagatgccatgttattaggaatgaaaggtatttctcaaataattgatatg
tatcctgagaatttaaagaattatcaaagagatgattctagcagacagtctcagcaaaat
aaatcagataataagaagagttatgcaaaaaaagatgagcgtgcattagaaagagataag
ttgaataacaattctgatgatcagaaaagcgaaaagaaaaatagaaaaagcaagatttta
gaaaataatgcaactcaactagataagataattccttctgataatgatagctctccaaaa
aaagatgcaaaaaagaaaggcaaaatcaatttagacataccaagcgatggagttattaag
tttagattagatagcgaaataattccttcgttaattggaagaaaaggcgttgtgattaat
gatgtgtctgaatcttctggtgcgcaaatagacattggaaagcaagataactctatatca
atttctggtaaaagagaaagcatacaaatcgctttgagtagagtatttcaaattatgaaa
ggtgatgaaaaaatcacttttggtcaagtttttgaattaactgacaataaaataaaaatt
attacatttgatggagagaggaaaaatgttccttgggatggagcttctgacattaaagta
ggagatttcattaaggttactgttggaagatttggccatttaaaagaagtaatagataat
atatctttgcagtga
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