Candidatus Cytomitobacter indipagum: FZC35_02610
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Entry
FZC35_02610 CDS
T10104
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein VgrG
Organism
cip Candidatus Cytomitobacter indipagum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_GPD
Phage_base_V
Gp5_trimer_C
DUF6484
DUF2345
Motif
Other DBs
NCBI-ProteinID:
QEK38243
UniProt:
A0A5C0UF28
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All DBs
Position
576907..580071
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AA seq
1054 aa
AA seq
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MQNISGGKRKRGSDDDIQSTVVVEDNRRIVKVENKQEQVEPDSKKQKKADPYNIEWVATF
NYDLTDKPEDYVGHVFVLNIQEGLSEAFCVNGSGSFKNKQENMVGKKVRLGLSIGIPGLD
TKCWHGVVNKWEYLRDSSAKDVDGKKIHHYMYKFSIIPEIQFKLSTKRSRVFFPSGDDQS
YSDNQDIKFNRAKLMNYVAEKLIKDNGVDLQDNPPNEKRKKSIYEEYDAIYSFYDYLVGN
RENTDPENKVDRGLLEKLDEKNGISNNIAVQIKLVDAFGKLSKFDGKIPIKGADNSQKNA
IEKEEEATKHKCPPKRPFFNYEDKTNFSQTDEEEFPEYIVQYDETDWEFLNRLCREFGVY
YCFEHTDYHTGMVFYSNPQGGDSDNAFEDFGRFEEDEDDEDYESQENEESSAESKPYKTY
LGYENAILGYKPDGSYDEEAIKVHKSKQKSLKSNETSNSSAGNSDSDVGNNENIQNKSDD
KTIPHVTRGDENKVFDLSDPFTDSKPLYYSNANLKRADDQYISQWHEVNQFVQPAPQLYG
YNPDYDPEKRNVLREQDQSEGGGSFSESESANSEKGSSRIQNYYNENFTSEKRVNDYNEL
YKQHAQSTETEYYAKTYRQEISPGYKFVLTHHPDLDMNGQYYVKRAVHNLSYEVVNNADP
ESADLDDMELRYENEAVFAKIDQPFKILPIPQRKILGIQTGIVVGGEDQKIYTNHMGHVK
VYFHWDSARKDLSDGEKLQQAIWVRVAQWGGAGNEWGGFFVPRVGQEVIISFENGNPSKP
IVMGCLYNRSTMPPYNLVETEEVTAKTGIKTESLKDVEEGEEKGFNELSFEDKANEEKVF
LHAEKDYEQIIKDTRKSSIGSGSDELTISKGDRKVEILGEDDPTDGSGNDILIIKKGNKE
IKLESEEAKNFLTELKNGDIINKIEEGNYKLDLQKGNQEIKLQDGDVEISIEKGDMKINM
NQGDQKENITGNKDITIVNGNYTIKIVGGNMEIEASQISYQATDFSIKSAGNLSLEAGGN
LSIKGGNIEMKSETTADIEASAMMNINAGIVNIN
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacatatctggcggtaaaagaaaaagaggaagtgatgatgatattcaatctact
gtagtagttgaagataatcgtcgtattgttaaagtagaaaataagcaagagcaggtagag
cctgattctaagaagcaaaagaaagctgatccgtataatatagaatgggtcgcaacattt
aactatgacttaaccgataaaccagaagactatgttggtcatgtgtttgttttaaatata
caagaaggtttatctgaagctttttgtgtaaatggatcaggatcttttaaaaataagcaa
gaaaatatggttggcaagaaagttagacttggattaagtattggaatacctggtctagat
actaaatgttggcatggcgttgtaaataaatgggaatacttaagagatagtagcgctaaa
gatgtagatggcaagaaaatacatcactatatgtataagtttagcataattcctgaaata
caatttaagttaagcacaaaacgaagcagagttttcttcccatctggtgatgatcagtca
tattctgataatcaagatatcaagtttaatagggcaaaattgatgaattatgttgcagaa
aaactgattaaagataatggagttgatttacaagataatcctccaaatgaaaaaagaaag
aaaagtatatatgaagaatatgatgctatatactcattctatgattatttagttggaaat
agggaaaatactgatccagaaaataaagttgatagagggcttcttgaaaaattagatgag
aaaaatggtatatcaaacaacattgcagtgcaaattaaacttgttgatgcttttggtaaa
ttgagcaaatttgatgggaagataccaatcaaaggtgcagataactctcaaaagaatgca
attgaaaaggaagaagaagcaacaaaacataaatgcccacccaagcgcccatttttcaat
tacgaagataaaactaacttttcacaaacagatgaagaagagtttcctgagtatattgtg
cagtatgatgagacggattgggaatttttaaatagattgtgcagggagtttggagtgtat
tattgcttcgaacatactgattatcatactggaatggtgttttatagtaatcctcaagga
ggagattctgacaatgcattcgaggattttggaagatttgaggaagacgaagatgatgag
gattatgagtcgcaagaaaatgaagagtcttcagccgaatccaaaccatataaaacttat
ctaggatatgaaaatgcgattttaggctataagccagatggctcatatgatgaggaagcg
attaaagttcataaaagtaagcagaaatcacttaaatctaatgaaacttctaatagttct
gcaggaaattctgattctgacgtagggaataacgaaaatatccagaataaaagcgatgat
aaaacaattcctcatgtaacacgtggcgatgagaataaggtttttgatttgagcgatcca
ttcactgattcaaagccattatattatagcaatgcaaatttgaagcgagcagatgatcaa
tatatttctcaatggcatgaagtgaatcaattcgttcagcctgctccacaactttatgga
tataatcctgattatgatccagaaaagcgtaatgttcttcgtgagcaagatcaaagtgaa
ggtggaggcagtttttctgaaagtgaaagtgcaaattcagaaaaaggaagcagtagaatt
cagaattactataatgagaattttacatctgagaaacgagtaaatgattataatgagcta
tataaacagcatgcccaatctactgagacggaatattatgcgaaaacttatcgtcaagaa
attagccctggatataaatttgtccttacacatcaccctgatttagatatgaatgggcaa
tattatgtaaagcgagctgttcataatttgagctacgaagttgtaaataatgcagacccc
gaatctgcagatttggatgatatggagttgcgttatgaaaatgaagctgtgtttgcaaaa
atagatcagccatttaagattttgccaattcctcaaaggaaaattcttggaattcaaact
ggaattgttgttggaggggaagatcagaaaatttatactaatcatatgggtcatgtgaag
gtttattttcattgggatagcgcgagaaaagatttaagtgatggagaaaaacttcagcaa
gcaatttgggttcgtgtagctcaatggggaggagctggaaatgaatggggaggatttttt
gtacctcgcgttggtcaagaggttataatttcattcgaaaatggcaatcctagcaagccg
attgtgatgggatgtttgtataatcgctcaacaatgcctccatataatttagtggaaact
gaagaagttacagcgaaaactggaatcaaaacggagtctttaaaagatgttgaagaagga
gaagaaaaaggatttaatgagcttagctttgaggataaagcaaatgaggaaaaggttttt
cttcatgctgaaaaagattatgaacagattattaaagatacgcgcaaatctagtatagga
agcggttcagatgaattaactattagcaaaggtgatagaaaagtagagattctaggcgag
gatgatccaacagacggctctggaaatgatattctgattattaaaaaaggaaataaggaa
ataaaacttgaatctgaagaggcgaagaattttcttacagagctaaaaaatggagatata
attaataaaattgaagaggggaattataaactagatctgcagaaaggaaatcaggagatc
aaattacaagatggggatgttgaaattagtattgaaaaaggagatatgaagataaatatg
aatcaaggagatcaaaaagaaaatattactggaaacaaagatataactattgttaatgga
aactatactataaaaattgtgggaggaaatatggagattgaggcaagtcaaatttcatat
caggcaactgatttctcgattaaatctgcaggtaatttgagcttggaagctggtggaaat
ctgagcattaagggaggaaatatagagatgaaaagtgaaacaacggcagatattgaggcg
tcagcgatgatgaatatcaacgcaggaatagtgaatataaactaa
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