Citrobacter sp. TBCP-5362: FD428_00510
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Entry
FD428_00510 CDS
T10692
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq00541
Biosynthesis of various nucleotide sugars
ciq01100
Metabolic pathways
ciq01250
Biosynthesis of nucleotide sugars
Module
ciq_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FD428_00510 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ciq01005
]
FD428_00510 (rfaD)
Enzymes [BR:
ciq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FD428_00510 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ciq01005
]
Core region
FD428_00510 (rfaD)
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Paralog
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
QCQ69568
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Position
complement(107109..108041)
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKSLNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEEFGDIEAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERDIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEASSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGETPKLFEGSENFKRDFVYVGDVADVNLWFWENGVSGIFNLGTGRA
ESFQAVADAALAYHKKSDLEYIPFPEKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacatcgttaagtccctgaat
gataaaggcatcaccgatatcctggtggtggacaacctgaaagacggcaccaagttcgtc
aacctggtggacctgaatattgctgactatatggataaggaagacttcctgatccagatt
atggccggagaagagttcggcgatatcgaagcggttttccacgaaggcgcctgttcttcc
accaccgagtgggacggcaagtatatgatggacaacaactatcaatactccaaagagctg
ctgcactactgcctggaacgtgacattccgttcctgtatgcctcttctgcggcaacttac
ggcggtcgcacctctgacttcattgagtctcgtgaatatgagaaaccgctaaacgtttac
ggctactctaaattcctgttcgacgagtatgtacgccagatcctgcctgaagccagctcg
cagattgtaggtttccgctatttcaacgtttacggaccgcgtgaaggccataaaggcagc
atggcgagcgtcgctttccatctgaatactcagctcaacaacggtgaaacgccgaaactg
tttgaaggcagcgaaaacttcaaacgcgattttgtctacgtcggcgacgtggctgatgta
aacctgtggttctgggaaaacggcgtgtccggcatctttaacctgggcaccgggcgcgcg
gaatccttccaggccgtggcggatgccgcgctggcttatcacaagaaaagcgaccttgag
tacattccgttcccggaaaaactgaaaggccgttaccaggcgttcacgcaggcggatctg
accaatctgcgcgccgcaggctatgacaaaccgttcaagaccgttgccgaaggcgtaacg
gagtatatggcctggctgaatcgcgacgcgtaa
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