Citrobacter sp. TBCP-5362: FD428_00955
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Entry
FD428_00955 CDS
T10692
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ciq Citrobacter sp. TBCP-5362
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
FD428_00955 (hmsP)
Enzymes [BR:
ciq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
FD428_00955 (hmsP)
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
Motif
Other DBs
NCBI-ProteinID:
QCQ69653
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Position
207849..209855
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSAA
ILKADIPEAETILARIQPAGVVSRADVVLPNQFQALRMSFIPERSVPVTVTRLFELPVQI
SLPVYSLERPANPQPLAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLMLTVAITWCMNR
LIVHPLRKIARELNDIPPQELTGHQLALPRLHHDDEIGMLVRSYNLNQQIAQRHSIEQND
HAMRFPVSELPNKAFLMGLLEQVVTRQQTTALMIVTCETLRDTAGVLKETQREILLLTLV
EKLKSVLAPRMVLTQVSGFDFAIIAHGVKEPWHAITLGQQVLTVINERLPIESIQLRPSC
SIGVAMFYGDLTAEALYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLTEESDILNAL
DNHQFAIWLQPQVEMSSGKVLSAEALLRVQQPDGSWELPEGLIDRIESCGLMVTVGYWVL
EESCRQLSAWQERGVMMPLSVNLSALQLMHPNMVSDLLELLSRYRIQPDTLILEVTESRR
IDDPHAAVAILRPLRSAGVRIALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVEGLPED
DSMVTAIILMARSLNLKMIAEGVETEAQRDWLAQAGVDVAQGFLFARAVPPDVFEERYLK
NAQPDYKT
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcagccgctcgttaacaattaagcagatggcaatggttgcggccgttgtcctg
gtgtttgtatttattttttgcaccgttttgctgtttcatttagtacagcagaaccgctat
aacacggctacgcaactggaaagtatcgcccgttctgtccgcgaaccgctgtccgccgca
atcctgaaagcggatatccctgaagcggaaaccatcctggcgcgcattcagcctgcgggc
gtggtcagccgcgccgacgtggtgctgccgaaccaattccaggcgctacgaatgagtttt
attcctgagcgctccgtcccggtgacggtgacgcgtctgtttgaactgccggtgcagatc
tcgctgccggtctattcccttgagcggccagccaacccacagccgctggcgtatctggtg
ctccaggcggactcgttccgcatgtataagttcgtgatgagcacgctctcgacgttagtg
accatttacttacttttatcgctgatgctgacggtggcgataacctggtgtatgaaccgc
ctgattgtgcatcctctacgcaaaatcgcccgggagcttaacgatatcccgccgcaggag
ctgacaggccatcagctggcgctaccgcgtctgcatcatgacgatgagattggtatgctg
gtgcgtagctacaacctgaatcagcagattgcccagcgtcacagcattgagcaaaacgat
catgcgatgcgctttccggtttccgagcttcccaacaaggcttttctgatggggcttctg
gaacaggttgtgacgcgtcagcagacgacggcgttaatgattgtcacctgtgaaacgctg
cgcgataccgcaggcgtgctcaaagagacgcagcgggaaatcctgttgcttacgctagtg
gaaaaactgaaatcggtgctggcgccgcgaatggtgctgacgcaggtgagcggctttgat
ttcgccatcatcgcgcacggcgtaaaagaaccgtggcacgcgattacgttaggtcagcaa
gtgctcactgtcattaatgaacggctgccgatcgaaagcatccagctacgccccagttgc
agcattggggtggcgatgttttacggcgacctgacggccgaggcgctttatggtcgcgcc
gtctccgccgcctttaccgcccgccgcaaaggtaaaaatcagattcagttctttgacccg
gcgcagatggaggccgcgcagcagagattgacggaagagagcgatattctcaacgcgctg
gataaccaccagttcgccatctggctgcaaccgcaggtggagatgtccagcggtaaggtc
ctgagcgcagaagcattattacgcgtgcagcagccggatggcagttgggaactcccggaa
gggttaattgaccgtatcgaatcctgtggtctgatggtgacggttgggtactgggtgctg
gaagagtcctgtcgccagctttccgcctggcaggagcgtggcgtgatgatgccgctctcg
gtgaatctttccgcattgcagctcatgcacccgaatatggtgtcggatctgctggagctg
ctaagccgctatcgtattcagccggatacattgattctggaagtaacggaaagccgacgc
atcgacgacccgcatgccgccgtcgccatcctgcgcccgctgcgcagcgcgggcgtacgc
atcgcgctggatgactttggtatgggatacgcagggttgcgtcagcttcagcacatgaaa
tcgctgccggtcgatatactaaaaatcgacaaaatgtttgttgagggattgccggaagat
gacagcatggtcacggcgattatcctgatggcgcgcagccttaacctgaaaatgatcgcg
gaaggcgtggagaccgaagcgcagcgcgactggctggcgcaggcaggggtggacgtggcg
caaggtttcttgtttgcccgcgcggttccgccggatgtgtttgaagaacgttacctgaag
aacgcgcagcctgattacaaaacttaa
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