Citrobacter sp. TBCP-5362: FD428_01730
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Entry
FD428_01730 CDS
T10692
Name
(GenBank) autotransporter domain-containing protein
KO
K12516
putative surface-exposed virulence protein
Organism
ciq Citrobacter sp. TBCP-5362
Brite
Transporters [BR:
ciq02000
]
Other transporters
Pores ion channels [TC:
1
]
FD428_01730
Secretion system [BR:
ciq02044
]
Type V secretion system
Autotransporter-1 (AT-1) family
FD428_01730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QCQ73497
LinkDB
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Position
complement(376544..382072)
Genome browser
AA seq
1842 aa
AA seq
DB search
MQRKKLLAVGIAIALQTYYCPAIAAENTEDEKECPVNISSLSQAERNKLPAKCLTAEAGQ
DNHWAWVASGVAALAAGIAIGNHSDGDSHHHSTTPVPPDDGGDVTPTPPDDGGDVTPTPP
DDDGDVTPPDDGGDTPVPPDDTSVTTFSNQVTLDKGTDTLHFDDIKLDNGEHLGEATLSY
SEQDAQWQLTTQDGKTLAISGWNVTDSNAAVIEGAQANGFYWKYDSRGYLILADNNTQVV
TGDGKTHTTDRELDIGGKNRTGVIISGDNTRNTLNGDSTVTNGAVGLVISGDGTTNAISG
KSTVDGATGALISGNGTSTSLSGDITISGGGTGIVIDGDNTLIDNAGTSSISGAGSTGSI
INGNNIRLINEGELNVSDGGTGAKITGDDAIVDNKGHSTTRGAGSTGLYIEGDNALVINE
GNQLIADGATGVRIDGDNARVLNTGNMAVDGAGSTIATITGNNADMTQNGDLLVMNGATG
LTINGEESELINSGTTTVRNDGSVGFVVAGTQNTFNNKGNINTSLNGTGTLISGTESQVS
LTGDINVTAAQDSSGVFRGATGLNVSGDTNTTTILGNVNIEAGYAQDAQIKSDEQLQGIT
VNGNQNTVNLDGAMNIHLDSSDVSSGYASVTGLNISGSGNAVNVAGGINIDFSQNEASIG
SEAIGINIDGDNTLTLSGKSTVDMTTITGGQATLANVNNGGSLLITDDATIEVNADYLNL
NYSTGSNALLSAHGQGSTIENQGDITTHGTVNVLLADKGAEASNSGNILIYGSSGDTGDD
RSAITRANGEDTVVHNKAGADITLFSNQTPEFINGINIYPERWYTHTLYAMLATQGGSVV
NDKGATVHLQGAGAYGVSASVGTALNEGDIYLDGFIPTLDDENNIISTDYWQPTYLYLTS
SAMVAGSSDIGYGDATAINTGTITVNNAGFGMMALSGGTAVNQGTITLTADEGVTGEENQ
LVGMAALNGGTVVNDTTGTINIDADYGQAFLSDSNSYIINNGAINLNGSPMDENDPHMGS
IPTDKIWIRSLPGSGDSDSQTSEAGFFTTGALANYGNETLNGDLDVSGWLYNEAGATLTV
NGDMAINNAGNMENHGTMHADTITTYHSLFNRADGSLTTDLLTLNGDITLFNEGSFTGSI
AGTSYAQEVVNTGNMTVAEDGKSLINGSFAFYNQEGATLTNSGSAVEGGENTIINMTRTS
SSIAQVNSGTITATNGYSAITTANASNSPMWIWNTETGVINGINPDAPLINLSRGYSFGN
EGTINVQGDNAVAISGGTSSYIIDLVNSGTINVGTEQGQIDGTNGTGLIGIKGNGNATTI
NNTADGVINVYANDSYAFGGQSKTIINNGEVNLLCDTGCGIYAPGTTGTQDDHNGTADIV
IPDAIVAPTQGDIPAPPADPNAPQMLSNYIVGTNADGSSGTLKANNLMIGDDVKVNTGFT
AGTAETTVVVDNAFTGSNIQGADNITSTSVVWNAQGSTDGDGNVDITMTKNAYADVATES
SVNDVAQALDAGYTNNELYNSLNVGTTAELNNALKQVSGSQANTVFREARVLSNRFTMLA
DAAPQVKDGLAFNVMAKGDPRAELGNDTQYDMLALRQTLDLTASQNLTLEYGIARLDGDG
SQKAGDNGVTGGYSQFFGLKHSMTFNEGLAWNNSLRYDVHNLDSSRSVAYGDVNKVADSD
ARQQYMEFRSEGAKTFNLMDDALKITPYAGVKLRHTLEEGYKERSAGDFNLSMNSGSETA
VDSVLGLKMDYAGENGWSASATLEGGPNLSYTKSQRSATLAGASDQRFSVDDGQKGGGLN
GLATMGVKYSAQDSSLHLDAYQWKEDGISDKGFMLNFKKTFR
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggaaaaaactccttgcagtgggtattgcgattgcactgcaaacatattactgc
ccggcgatagcggcagagaatacagaagatgagaaagaatgtccggtaaatatttcgtcg
ttatctcaggcggaacgcaataagttaccagcgaaatgtctgacggcagaagccgggcag
gataaccattgggcatgggtcgccagcggcgtagcggctctggcggcgggcatcgccatt
ggcaatcacagcgacggcgattctcaccaccattcaacaacgccagtcccgccagacgac
gggggcgacgttaccccaacgccgccggatgacggcggagatgtcaccccaacgcctccc
gatgatgacggcgacgtcacaccgcccgatgatggcggtgatacgccagtaccgcctgac
gacacatctgtgacgaccttcagcaatcaggtgacgctggataaaggcacagacaccctg
cacttcgacgacatcaaactggataacggcgagcacctcggcgaagccacgctcagttat
tccgaacaagacgcgcagtggcagttaaccacccaggacggcaaaacgctggcgatttcc
ggctggaacgttaccgacagcaacgcggccgtgattgaaggcgctcaggccaacggcttt
tactggaagtacgacagtcggggctatctgatcctcgcggataacaatactcaggttgtc
accggagacggcaagacgcacaccaccgatcgcgaactggatatcggcgggaaaaatcgt
accggcgtcattatctcgggcgataacacccgtaatacgctgaacggggattccaccgtg
accaatggcgcagttggcctggttattagcggcgacggcaccactaacgctatctcaggc
aaaagtacggtagatggcgctaccggggcgttaatttccggcaatggcacctcaacctcg
ctctccggcgatatcaccatcagcggcggcggtacgggcatcgttatcgatggtgataac
accctcattgataatgcggggacttccagcattagcggcgcaggttctaccggttccatc
attaacggcaataacattcgcctcatcaacgaaggggaattaaacgtttctgacggcggc
accggggccaaaatcaccggtgacgatgctatcgtcgataacaaaggccattcgacaacc
cgcggtgccggctctacggggttgtacattgagggtgataatgcgctggtgattaatgaa
ggtaatcagctcatcgccgatggcgcgacgggcgtgcgcattgatggcgacaacgcccgc
gtactcaataccggtaatatggccgtcgacggcgctggctcaacgatcgccaccattacg
ggcaataacgctgacatgacgcagaatggcgacctgctggttatgaatggcgcgacgggc
ctgaccatcaacggcgaagaaagcgaactcataaacagcggcaccaccaccgtgcgtaac
gacggctcagtgggcttcgttgttgccggtacacaaaacaccttcaacaacaaaggtaat
atcaacaccagccttaacggtacgggaacgctgatcagcggtactgaatcgcaggtcagt
ctgacgggcgatattaacgtgactgcggctcaggacagcagcggcgtatttcgtggggca
accggtcttaacgtctctggcgacacaaatacgacaaccattctgggtaatgtgaacatc
gaggctggttacgcgcaagacgctcaaattaaaagcgatgagcagttacaaggcattacc
gtcaacggcaatcaaaatacggtcaatctggatggcgcgatgaatatccatcttgacagt
tctgatgtcagctctgggtatgcgagcgttaccggcctcaatatcagcggcagcggtaac
gccgtgaatgtcgccggtggtataaacatcgacttttcccaaaacgaagcgtctattggc
tctgaagctatcggtatcaatattgatggtgacaacacgttaacgctaagcggtaaatct
accgtggatatgaccactatcacaggtggccaggccacgctggcaaacgttaataatggc
ggctctctgctcattaccgatgacgccacgattgaagtgaacgccgactatctgaactta
aattactccaccggaagtaatgccctgctgtcagctcatggccagggctcgacaattgaa
aatcagggcgatattaccacccacggaacagtcaacgttctccttgccgataagggagcg
gaagcaagcaacagtggcaatattctcatctacggaagcagtggcgatacgggagatgac
cgttctgccatcacccgtgcaaatggcgaagatacggtcgtacacaacaaagcaggggcc
gatatcaccctcttttctaaccaaacgccagagttcattaacggtatcaatatctacccg
gaaagatggtatacccacacgctttacgccatgctggcgacccagggcggcagcgtcgtt
aatgataaaggagcgaccgtccatttacagggcgcgggagcatatggcgtcagtgccagt
gtagggacggcgttaaacgaaggcgatatttatctggacggttttatcccgacgctggac
gatgaaaacaatatcatcagcacagactactggcagccgacatatctctatttgaccagc
tcggcaatggttgccggttcctcagacatcggctacggtgacgccacggccatcaacacc
ggcaccatcaccgtcaacaacgccgggttcggtatgatggcgctcagcggcggcacggcc
gttaaccagggtactattacgctgaccgctgatgaaggtgtgaccggcgaggaaaaccaa
ctggtggggatggccgcattaaacggcggcaccgtcgtgaacgacaccaccggcaccatc
aatattgatgccgactacggtcaggcgttccttagcgacagcaacagctacatcatcaat
aacggcgccatcaacctgaacggcagcccgatggacgaaaacgacccacatatgggttcc
ataccaaccgacaaaatctggatacggtcgctgcccggcagcggcgacagcgatagccaa
acgtcagaagcgggctttttcaccaccggagcgctggcgaattacggcaatgaaacgctg
aacggcgatctcgatgttagcggctggctgtacaacgaagcaggcgccacgctgaccgtc
aacggcgatatggcgattaataacgctggcaatatggaaaaccacgggacgatgcatgcc
gatacgatcaccacgtatcacagcctgttcaaccgcgcagacggcagcctgaccactgac
ctcctgacgcttaatggcgatatcaccctgttcaacgagggcagctttaccggctcaatt
gcaggaacctcttacgcccaggaagtcgtcaataccggcaatatgacggtggcggaagat
ggcaaatcgctcatcaacggcagctttgcgttttataaccaggaaggcgcaacgcttacc
aacagcggcagcgcggtagaaggcggcgaaaacaccatcatcaacatgacgcgtaccagc
agttccatcgctcaggtgaacagcggcaccattaccgccaccaacggttacagcgccatc
accaccgcgaatgccagcaactccccgatgtggatctggaacacggaaaccggcgtgatt
aatggtattaacccggacgcccccctgatcaacctcagccgtggctatagctttggcaac
gaagggaccattaacgtccagggcgacaatgccgtggcgatcagcggcggcaccagcagt
tatatcatcgacctggtcaacagcggcaccatcaacgtcggcaccgaacaggggcaaata
gacggaaccaacggcaccggacttatcggcatcaaaggcaacggcaacgccaccaccatc
aacaacaccgccgatggcgtgatcaacgtgtacgcgaatgactcttacgcgtttggcggc
cagagcaaaaccatcatcaataatggcgaagtgaatctgctgtgcgacaccggctgcggc
atctacgcccctggcactacgggtacgcaggacgatcacaacggtacggcggatatcgtg
atcccggatgcgattgtcgcgccgacgcagggtgatattccagcgcctccggccgatccg
aacgcgccgcagatgttaagcaactacattgtgggcaccaatgccgacggcagttccggt
acgctgaaagcgaataacctgatgattggcgacgacgtgaaggtgaataccggctttacc
gcaggtacggcagagaccaccgtcgtggtcgataacgcctttaccggcagtaatatccag
ggcgcggacaatatcacctccaccagcgtggtgtggaacgcccagggcagcaccgacggc
gacggcaacgttgacatcaccatgaccaaaaacgcctatgcggatgtggcgacggagagt
tccgtcaacgacgtcgcacaggcgctggacgccgggtataccaacaatgagctgtacaac
agcctgaacgttggcacgaccgcagagctgaacaacgccctgaagcaggtcagcggcagc
caggcgaacaccgtctttcgcgaagcccgcgtactcagcaatcgctttacgatgctggcg
gacgccgcgccgcaggtgaaagacggtctggcgttcaacgtgatggcgaaaggcgatccg
cgtgccgaactgggtaacgacacccagtacgacatgctggcgctgcgccagacgctggat
ctgaccgccagccagaacctgacgctggaatacggtattgcccgtctggacggcgacggt
tcgcagaaagcgggcgacaacggcgtgaccggcggctacagccagttcttcggcctgaaa
cacagcatgacctttaatgagggtctggcctggaacaacagcctgcgttatgacgtgcat
aacctcgacagcagccgctctgtcgcctatggcgacgtcaataaagtggcggattccgac
gcccgtcagcagtacatggaattccgcagcgaaggggcaaaaacctttaacctgatggac
gatgcgctgaaaatcacgccgtatgcgggcgttaagctgcgtcatacactggaagaaggt
tacaaagagcgcagcgccggggacttcaacctgtcgatgaacagcggcagcgaaacggcc
gtagattccgtgcttggcctgaaaatggactacgccggggaaaacggctggagcgcaagc
gccactctggaaggcggcccgaacctgagctacacgaaaagccagcgtagcgccacgctg
gcgggtgcaagcgaccagcgctttagcgttgacgacggccagaaaggcggcggtctgaac
ggtctggcaacgatgggcgtgaagtacagcgcccaagacagcagcctgcatcttgacgct
tatcagtggaaagaggatggcatcagcgataaaggctttatgctgaactttaagaaaaca
ttccgttaa
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