Citrobacter sp. TBCP-5362: FD428_04025
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Entry
FD428_04025 CDS
T10692
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FD428_04025 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ciq01007
]
FD428_04025 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ciq03016
]
FD428_04025 (lysS)
Enzymes [BR:
ciq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FD428_04025 (lysS)
Amino acid related enzymes [BR:
ciq01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FD428_04025 (lysS)
Transfer RNA biogenesis [BR:
ciq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FD428_04025 (lysS)
Prokaryotic type
Other AARSs
FD428_04025 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AsnA
IRF-2BP1_2_M
Motif
Other DBs
NCBI-ProteinID:
QCQ70211
LinkDB
All DBs
Position
832012..833529
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AA seq
505 aa
AA seq
DB search
MSEQHAQGADAVTDLNNELKTRREKLASLREQGIPFPNDFRRDHTSDQLHADFDAKENEE
LEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD
ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES
RNTFKVRSQIMAGIRQFMVGRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQDILGKTEVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI
KVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFQDQVNAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaacacgcacagggcgctgacgcggtaaccgatcttaacaacgaactgaaa
acgcgccgcgagaagctggctagcctgcgcgagcagggtatcccgttcccgaatgatttc
cgtcgcgatcacacctcagaccaactgcacgctgacttcgacgcgaaagagaacgaagaa
ctggaagcgctgaacatcgaagtgtccgttgcgggccgtatgatgacccgtcgtattatg
ggtaaagcgtctttcgttacgttgcaggatgtcggcggccgtattcagctgtacgttgcc
cgtgacgatctgccggaaggcgtttacaacgagcagttcaaaaaatgggatctgggcgat
atcctcggcgcgaaagggaagctgttcaagaccaaaaccggtgagctgtccatccactgc
accgaactgcgtctgctgaccaaagcgttgcgtccgctgccggataaattccacggcttg
caggatcaggaagcgcgctatcgccagcgttacctggatctcatctctaacgatgaatcc
cgtaacacctttaaagtccgttcacagattatggcgggtattcgtcagttcatggtgggc
cgcggctttatggaagtagaaaccccgatgatgcaggtgattcctggcggtgcggcagca
cgtccgtttatcacccatcacaacgcgctggatctggacatgtacctgcgtatcgcgccg
gaactgtacctgaagcgtctggtggttggcggcttcgagcgtgtgttcgaaatcaaccgt
aacttccgtaacgaagggatctccgttcgtcataacccagagttcaccatgatggaactc
tatatggcgtatgcggactataaagacctgatcgaactgaccgaatcgctgttccgtacg
ctggcgcaggatatcctgggcaaaactgaagtgccttacggcgatgaagtgttcgacttc
ggcaagccgttcgaaaaactgaccatgcgcgaggctatcaagaaataccgtcctgaaacg
gatatggccgatctggataacttcgactccgccaaagcgatcgctgaatctatcggcatc
aaggttgagaaaagctggggcctgggccgcatcgtaactgagatcttcgaagaagtggcg
gaagcgcacctgattcagccgaccttcatcaccgaatatccggcagaggtttctccgctg
gcgcgccgtaacgacgtgaacccggagatcaccgaccgctttgaattcttcatcggcggc
cgtgaaatcggtaacggctttagcgagctgaacgatgcagaagatcaggcgcagcgtttc
caggatcaggttaacgcgaaagaagccggtgacgacgaagcgatgttctacgacgaagac
tacgttaccgctctggagcacggcctgccgccgacagcgggtctgggaattggtatcgac
cgcatggtaatgctgttcaccaacagccacaccatccgcgacgtgattctgttcccggcg
atgcgtccggtaaaataa
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