Citrobacter sp. TBCP-5362: FD428_04245
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Entry
FD428_04245 CDS
T10692
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FD428_04245 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciq03019
]
FD428_04245 (rppH)
Messenger RNA biogenesis [BR:
ciq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FD428_04245 (rppH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QCQ70252
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All DBs
Position
873396..873926
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AA seq
176 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINSGESAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMSADAEINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQESTPKPQNALAWRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccaaatgtaggtatcgtaatttgtaatcgccagggg
caggttatgtgggcccggcgatttggtcagcactcctggcaattcccgcaaggcgggata
aattcaggggagtcagcagaacaagcgatgtaccgggaactgtttgaagaagtcgggttg
agccgtaaagatgtgcggatacttgcttctactcgcaactggttgcgttacaagttaccg
aaacgtttggtgcgttgggacacgaagccggtttgtatcggccagaaacaaaaatggttt
cttctgcaattgatgagcgctgatgcggaaatcaatatgcaaaccagcagcacccctgag
tttgatggctggcgctgggtaagttactggtacccggtcaggcaggtggtgtcatttaaa
cgcgatgtctaccgcagggtgatgaaagagttcgcaagtgtcgtgatggcgcttcaggag
agtacgccgaagccacaaaacgcacttgcctggcgacgtaaaagaggttaa
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