Citrobacter sp. TBCP-5362: FD428_07925
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Entry
FD428_07925 CDS
T10692
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FD428_07925 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciq03400
]
FD428_07925 (alkA)
Enzymes [BR:
ciq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
FD428_07925 (alkA)
DNA repair and recombination proteins [BR:
ciq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FD428_07925 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QCQ70930
LinkDB
All DBs
Position
1652637..1653506
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AA seq
289 aa
AA seq
DB search
MYILSWQPPYDWSWMLGFLAARAVSGVETVEPARYVRSLATGEHRGLIAVVPEHQTHTLR
VTLSAGLLPVAEECLAKIERLFDLRCNPDQIADALGSLGAARPGLRLPGSVDAFEQGVRA
ILGQLVSVAMAAKLTAKVARRYGDVLADAPEYVCFPTPQTLAAADPFALKALGMPLKRAE
ALIHLARATLDGTLETSAPPDIALGVKNLQTFPGIGRWTANYFALRGWQAKDIFLPDDYL
IKQRFSGMTPAQIRRYAERWKPWRSYALLHIWYTDGWQPSVDGEITGVQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcctaagctggcagccgccttatgactggtcctggatgttgggttttctcgcc
gcgcgtgcggtgagcggcgtcgaaacggttgagcccgcgcgttacgttcgcagtctggcg
acgggagaacatcggggactgatcgccgttgtaccggagcaccagacgcatacgctgcgc
gtaaccctgagcgcgggcttgttgcccgtcgccgaagaatgtctggcaaaaattgaacgc
ctgttcgatctgcgctgtaaccccgatcagattgccgacgcgctcggcagtctgggggct
gcgcgaccgggattgcgcctgcccggctcggtggatgccttcgaacagggcgtaagggcg
atactcgggcaactggtcagcgtggcgatggcggcaaagctgacggcgaaagtcgcccgt
cgttatggcgatgtgcttgccgatgcgccggagtatgtctgtttccccacgccgcaaacg
ctggcggcggcggacccattcgcgcttaaagcactggggatgccgctgaaacgcgcggaa
gcgctgatccatctggcgcgtgcgacgctggatggaacgttagagacgtccgcgccgccg
gatattgcgctgggggtgaaaaacctgcaaacctttcctgggattgggcgctggacggcc
aactacttcgcgctgcgcggctggcaggcgaaagatatctttttgccggatgattatctg
attaaacagcggttttcgggaatgacgcccgcgcaaatccgccgttatgcggagcgctgg
aaaccctggcgctcctacgcgttgctgcatatctggtatacggatggctggcagccgtca
gttgatggcgaaataactggtgttcagtaa
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