Citrobacter sp. TBCP-5362: FD428_08695
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Entry
FD428_08695 CDS
T10692
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ciq Citrobacter sp. TBCP-5362
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciq03400
]
FD428_08695
DNA repair and recombination proteins [BR:
ciq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
FD428_08695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
QCQ71070
LinkDB
All DBs
Position
1808642..1809112
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AA seq
156 aa
AA seq
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MADVHDKATRSKNMRAIATRDTAIEKRLAGLLQEQGMAFHVQDATLPGRPDFVVDEYRCV
IFTHGCFWHHHDCHLFKVPATRTEFWLNKIGKNVERDRRDMLRLRELGWRVLIVWECALR
GRLKLSDAALAERLEEWICGGGPTAQIDTQGIHLLE
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtacacgataaggcgacgcgcagcaagaatatgcgggcgatagccacgcgc
gatacggcgatagaaaaacgccttgccggtctgttgcaggagcaggggatggcgtttcat
gtgcaggacgccacgttgcccggacgcccggattttgtcgtggatgagtatcgctgcgtt
atcttcacgcacggctgtttctggcatcatcacgactgccacctgttcaaagttcccgcc
acgcgtaccgagttctggctgaacaaaatcggtaaaaatgtggagcgcgatcggcgagac
atgctgaggcttcgcgagcttggctggcgtgtgctgattgtctgggagtgtgctttgcgt
ggccggttgaaactcagcgacgccgcactggcggaacggcttgaagagtggatctgcggc
ggtggccccaccgcgcagatcgacacgcagggtattcatttactggagtga
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