Citrobacter sp. TBCP-5362: FD428_09505
Help
Entry
FD428_09505 CDS
T10692
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq00061
Fatty acid biosynthesis
ciq00071
Fatty acid degradation
ciq01100
Metabolic pathways
ciq01212
Fatty acid metabolism
ciq02024
Quorum sensing
ciq04146
Peroxisome
Module
ciq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FD428_09505 (fadD)
00071 Fatty acid degradation
FD428_09505 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FD428_09505 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
FD428_09505 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ciq01004
]
FD428_09505 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ciq04147
]
FD428_09505 (fadD)
Enzymes [BR:
ciq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FD428_09505 (fadD)
Lipid biosynthesis proteins [BR:
ciq01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FD428_09505 (fadD)
Exosome [BR:
ciq04147
]
Exosomal proteins
Exosomal proteins of breast milk
FD428_09505 (fadD)
Exosomal proteins of breast cancer cells
FD428_09505 (fadD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QCQ71220
LinkDB
All DBs
Position
1965297..1966982
Genome browser
AA seq
561 aa
AA seq
DB search
MKKVWLNRYPADVPAEINPDRYQSLVELFEHAVVRYADQPAFVNMGEVMTFRKLEERSRA
FAAYLQEGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS
GAAAIVIVSNFAHTLEKVVDKTSVQHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHL
PDAISFRRALHAGYRMQYVKPELVTEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVKG
TYGPLLHEGKELVVTALPLYHIFALTMNCLLFIELGGQNLLITNPRDIPGMVKELAKYPF
TAMTGVNTLFNALLNNKEFQQLDFSTLHLSAGGGMPVQHAVAERWVKLTGQYLLEGYGLT
ECAPLVSVNPHDIDYHSGSIGLPVPSTDVKLVDDEGNEVPTGEPGELCVKGPQVMLGYWQ
RPDATDEIVKDGWLYTGDIAVIDDEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGV
QEVAAVGVPSGSSGESVKIFVVKKDPALTDEALITFCRRQLTGYKVPKLVEFRDELPKSN
VGKILRRELRDEARGKVDNKA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaggtttggcttaaccgatatcccgctgatgtcccggcggagatcaatcctgac
cgttatcaatccctggttgaattatttgaacatgccgtcgtgcgttacgccgaccagcct
gcgttcgtcaatatgggggaggtgatgaccttccgcaaactggaagagcgcagccgggca
ttcgcggcctatttgcaggaagggctgggcctcaaaaaaggcgaccgtgtcgcgctaatg
atgccgaatctgctgcaatacccggtcgcgctgtttggtattttgcgcgccgggatgatc
gtcgtgaatgtcaacccgctgtatacgccgcgtgagcttgagcatcagctcaatgacagc
ggggcggcggctatcgtgatcgtctctaactttgcccacacgctggaaaaagtggtcgat
aaaacgtccgtacagcacgtaattctgacgcgcatgggcgaccagctttctaccgcgaaa
ggtacgctggttaactttgtcgtgaaatacattaagcgtctggtgccgaaatatcacctg
ccggacgcgatctcttttcgccgcgcgctacacgcaggttatcggatgcagtacgtgaag
cctgagctggtcaccgaagatctggcgttcctgcaatacacgggcggtacaaccggcgta
gcgaaaggcgcgatgctgacgcaccgcaacatgctggcaaacctggagcaggtaaaaggc
acctacgggccgttgctgcatgaggggaaagagctggtggtgacggcgttgccgctgtat
cacattttcgcgttgaccatgaactgcctgctgtttattgaactgggcgggcaaaacctg
ctcatcactaacccgcgcgacattccgggcatggtgaaagagctggcgaaatatccgttt
accgcgatgaccggcgttaacaccctgtttaacgccttgctgaacaacaaagaattccag
caactggacttctctacgttgcacctttctgctggcggcggtatgccggtacagcatgcg
gttgcagaacgttgggtgaaactgaccggacaatatttgcttgaaggctacggtctgacc
gagtgtgcgccgttggtcagcgtgaacccgcatgatatcgattatcacagcggcagtatc
gggctgcccgttccctctaccgatgtaaaactggtggatgacgagggcaacgaggtgccg
acaggcgagcctggcgagctgtgcgtgaaggggccgcaggtgatgctgggatactggcag
cgcccggacgcgacggatgaaatcgtcaaagacggctggctttacacgggggatatcgcg
gtgattgatgacgaagggttcctgcgcatcgtcgatcgcaaaaaagatatgattctggtt
tccggctttaacgtctatcctaatgaaattgaagacgtggtgatgcagcatcctggcgtt
caggaagtggcggcagtcggcgtgccttcgggcagcagcggtgaaagcgtgaaaatcttt
gtcgtgaagaaagacccggcgttgaccgacgaggcattgattaccttctgtcgtcgccag
ttgacggggtataaagtgccgaagctggtggagtttcgcgacgaactgcctaaatcgaac
gtcggaaaaattttacgacgagaattacgtgacgaagcgcgtggcaaagtagacaataaa
gcctga
DBGET
integrated database retrieval system
