Citrobacter sp. TBCP-5362: FD428_10060
Help
Entry
FD428_10060 CDS
T10692
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq00541
Biosynthesis of various nucleotide sugars
ciq01100
Metabolic pathways
ciq01250
Biosynthesis of nucleotide sugars
Module
ciq_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FD428_10060 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ciq01005
]
FD428_10060 (kdsA)
Enzymes [BR:
ciq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
FD428_10060 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
ciq01005
]
Lipid A
FD428_10060 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QCQ71322
LinkDB
All DBs
Position
2099880..2100734
Genome browser
AA seq
284 aa
AA seq
DB search
MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKVITDVHEASQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFHEGGNDKVILCDRGANFGYDNLVVD
MLGFSVMKKVSGNSPVIFDVTHALQCRDPFGAASGGRRAQVTELARAGMAVGLAGLFIEA
HPDPEHAKCDGPSALPLAKLEPFLKQIKAIDDLVKSFGELDTEH
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaaagtggttagcattggcgacatcaacgtggcaaatgacctgccattcgtg
ctgtttggcggtatgaacgtgctggaatcacgcgatctggcgatgcgtatctgtgaacac
tacgtaaccgtgacccagaagctgggtattccttatgtgttcaaagcctcttttgataaa
gccaaccgttcttctattcactcttaccgtggcccgggtctggaagaagggatgaagatt
ttccaggaactgaaacaaacgtttggtgtgaaagtgatcaccgacgttcatgaagccagt
caggcgcagcctgtcgccgacgtggtggatgtcattcagcttccggcattcctcgctcgc
cagaccgacctggtggaagcgatggcaaaaaccggcgcggtcattaacgtgaaaaaaccg
cagttcgtcagccctggtcagatgggcaatatcgtggacaaattccacgaaggcggcaac
gataaagtgatcctgtgcgatcgcggtgcgaacttcggctacgacaacctggttgttgat
atgctgggctttagcgtgatgaagaaagtttccggtaactcgcctgttattttcgacgtc
acccatgcgttgcagtgccgcgacccgtttggcgccgcgtctggcggtcgtcgcgcgcag
gttaccgaactggcgcgcgccggtatggcggtaggtctggccggtctgttcattgaagcg
cacccggacccggagcatgcgaaatgtgatggtccgtccgcgctgccgttagcgaagctg
gaaccgttcctgaagcaaattaaagcgattgacgatctggtgaaaagcttcggcgagctg
gataccgaacactaa
DBGET
integrated database retrieval system
