Citrobacter sp. TBCP-5362: FD428_12375
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Entry
FD428_12375 CDS
T10692
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
ciq Citrobacter sp. TBCP-5362
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciq03000
]
FD428_12375
Transcription factors [BR:
ciq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FD428_12375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
EAD2
Pkinase_fungal
Motif
Other DBs
NCBI-ProteinID:
QCQ73589
LinkDB
All DBs
Position
complement(2584101..2584889)
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AA seq
262 aa
AA seq
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MIGLRLDGYEPDLHHDAAVAFCIRAREDELFSPLHHHRKGQLILALHGAITCEVESAMWM
VPPQYAVWVPGEIPHSNHVTAGAELCFLFIEPDAVVMPDRCCTLKITPLCRELILALAAR
TDIQRTEPMTQRLTQVLFDELPQQPQEQMQLPVSGHPKIRQMVETMAREPARWQTLGQWA
SLFAMSERNLARLVVKETGLSFRRWRHQLQLILALQALIDGHSVQHVAQTLGYDSTTAFI
TMFKKGLGQTPGRYLAGLTASQ
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgattggcctgagactggatggctacgagcctgaccttcaccatgatgcggctgtggcc
ttttgcattcgcgctcgcgaagatgagcttttcagtccgctgcatcaccatcgaaaaggg
caactgatcctggcgctgcatggcgctattacctgcgaggtagaaagcgccatgtggatg
gtgccaccacagtatgcggtatgggttcccggcgaaattccccacagtaaccacgtcacg
gcgggggcggaattatgttttctgtttattgagccggatgcggttgtgatgccggatcgc
tgctgtacgctaaaaataacgccattgtgccgggagctgattctggcgcttgccgcgaga
acggatattcagcgtaccgagccaatgacgcagcgcctgacacaggtcttgtttgatgag
cttccgcagcaaccacaggagcagatgcagcttccggtctccgggcatcccaaaatacgt
caaatggtggagacgatggcgcgtgaaccagcccgctggcaaacgctgggacagtgggcg
agcctgttcgccatgagcgaacgcaatcttgcccgactggtggtaaaggaaaccggcctg
agctttcgtcgctggcgtcaccagttgcagcttattctggcgttgcaggcgttgattgac
ggacacagcgtgcagcacgtcgcccaaacgctgggttatgattcaacgaccgcgtttatc
accatgtttaaaaaggggctggggcaaacgccaggccgttatctggccgggcttactgct
tcccaataa
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