Citrobacter sp. TBCP-5362: FD428_13460
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Entry
FD428_13460 CDS
T10692
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FD428_13460 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ciq02000
]
FD428_13460 (msbA)
Enzymes [BR:
ciq01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
FD428_13460 (msbA)
Transporters [BR:
ciq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FD428_13460 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
AAA_25
AAA_16
DUF87
AAA_22
AAA_29
nSTAND3
ABC_membrane_2
AAA_18
RsgA_GTPase
APS_kinase
AAA_30
Cytidylate_kin
MMR_HSR1
SLFN-g3_helicase
AAA_15
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
QCQ71954
LinkDB
All DBs
Position
complement(2805904..2807652)
Genome browser
AA seq
582 aa
AA seq
DB search
MHNDKDLSTWQTFRRLWPTIAPFKTGLIVAGVALILNAASDAFMLSLLKPLLDDGFGKTD
RSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQS
TGTLLSRITYDSEQVASSSSGALITVVREGASIIALFIMMFYNSWQLSIILVILAPVVSI
AIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQ
GMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVIERSTGDLEFRNVTFTYPGRETPALR
NINLHIPAGKTVALVGRSGSGKSTIASLITRFYDINEGNILMDGHDLREYTLSSLRNQVA
LVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFISKMDDGLDTVIGENGVL
LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQSALDELQKNRTSLVIAHRLS
TIEQADEIVVVEDGIIVERGTHRELLEQRGVYSQLHKMQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcataacgataaagatctctctacgtggcagacgttccgccgactgtggcctaccatt
gcgcctttcaaaactgggctgatcgtggcgggtgtcgcgttgatcctcaatgcggccagc
gatgcttttatgttatcgctcctcaaaccattgctggacgatggttttggtaaaacagat
cgatcggtgctgctttggatgccgctggtggttattggcctgatgatattacgtggtatc
accagctatatttccagctactgtatttcatgggtatcgggcaaagtggtgatgaccatg
cgccgtcgtctgtttggtcatatgatggggatgcctgttgcattctttgataaacaatca
acggggacactgctttctcgtattacctatgactcagaacaggttgcgtcatcgtcttcc
ggggcgttgattacggtcgtgcgtgaaggtgcatcgatcatcgctttgtttatcatgatg
ttctataacagctggcaactgtcgatcattctggtcattctggcgcccgttgtgtctatt
gcgattcgcgtggtatcgaagcgttttcgtagcatcagtaaaaacatgcagaacacgatg
gggcaggtgaccaccagtgcagagcagatgctgaaaggccacaaagaagtgcttatcttt
ggcggtcaggaagttgaaacgaagcgttttgacaaagtcagcaataaaatgcgtctgcaa
gggatgaaaatggtgtctgcatcatccatctctgatccgatcattcagctgatcgcgtct
ctggcgctggcctttgttctctatgcggctagcttcccgagcgtaatggacagcctgact
gcgggtacgattaccgtcgtattctcatcaatgattgccctgatgcgtcctctgaaatcg
ctgaccaacgtcaatgcgcagttccagcgtggtatggcggcatgccagacgctgtttgct
attctggatagcgagcaagagaaagatgaaggcaaacgcgtaattgaacgttcgacaggc
gatctggaattccgcaatgtgacctttacctatccggggcgtgaaacgcctgcgctgcgc
aatatcaatctgcatattccggcgggtaagacggttgcactggtcgggcgttccggttca
ggtaaatcaaccattgccagtctgatcacgcgcttctacgacatcaatgaagggaatatc
ctgatggatggacacgatctgcgtgaatataccctgtcttcattgcgtaatcaggtcgcg
ctggtttcgcagaatgtgcacctgtttaacgatacggttgcgaacaacatcgcctatgcg
cgtactgaagagtacagccgcgagcaaattgaagaagcggcgcgtatggcgtatgccatg
gactttatcagcaagatggatgacggtctggatacggttatcggcgagaacggcgtactg
ctttccggtggccagcgtcagcgtatcgcgattgcccgtgcgttgctgcgtgacagccca
atcctgattctggatgaagccacttctgcgctggacaccgaatccgaacgcgcgattcag
tccgcgctggatgagttgcagaaaaaccgtacttcgctggttatcgcgcaccgtctttca
acgattgaacaagctgatgaaattgtcgtggtggaagacgggattattgttgagcgtgga
acccatcgcgaattgctggagcagcgcggtgtgtattcgcaactgcataaaatgcaattt
ggccaatga
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