Citrobacter sp. TBCP-5362: FD428_13495
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Entry
FD428_13495 CDS
T10692
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ciq Citrobacter sp. TBCP-5362
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ciq03009
]
FD428_13495
Ribosome biogenesis [BR:
ciq03009
]
Prokaryotic type
ribosomal protein modification factors
FD428_13495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QCQ71961
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Position
2816294..2818054
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AA seq
586 aa
AA seq
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MTQTFILGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTDDDALPEG
LLDDRLRAFYDPENELAGSMLIDLQSGNEDRGICGLPFTRQSDNHTVYIPMNIIGNLYVS
NGMSAGNTRNEARVQGLSEVFERHVKNRIIAESISLPEIPADVLARYPAVVEAIAKLEAE
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFADWSFSGTTEEEFATLM
AIFNAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETLLALPGS
AWEKEAYLNLIEQLDEEGFDDFTRVRELLGLATGPDNGWYTLRIGELKAMLALAGGDLEQ
ALIWTEWTMEFNASIFSAERANYYRCLQTLLLLAQEEDREPLQYLNAFVRMYGAEAVEAA
SAALSGEAAFYGLQAVDSDLHAFASHQSLLKAYEKLQRAKAAHWSK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacatttatcctcggcaaagacgccgccctggaagattccatcgctcgcttc
cagcaaaaactgctcgacctcggttttcatattgaagaggcctcctggctgaatccggtg
cctaacgtctggtcggtgcatattcgcgacaaagagtgcgcgttgtgctttaccaacggc
aaaggcgcaaccaaaaaagccgcgctggcttccgcgctgggtgaatattttgagcgtctg
tccaccaactatttcttcgccgatttctggctgggtgaaaccatcgccaatggcccgttc
gtgcattatccgaatgaaaaatggttcccgctaaccgatgacgacgccctgccggaaggg
ttactggatgaccgtctgcgcgcgttctacgacccggaaaacgagctggccggaagcatg
cttatcgatctgcaatccggtaacgaagatcgcggtatctgcggcctgccgtttacccgc
cagtctgataatcacaccgtgtatattccgatgaacattatcggcaacctgtacgtttcc
aacggaatgtcggccggtaacacccgcaacgaagcgcgtgtgcagggtttgtctgaagtg
ttcgaacgtcatgttaaaaaccgcatcatcgccgaaagcattagcctgccggaaattcca
gccgatgtgctggcacgctacccggcagtggtagaggccatcgctaagctggaggcggaa
ggtttcccaatcttcgcttatgacggctcgctgggcggtcagtatccggttatctgcgtc
gtcctgttcaacccggccaacggcacctgcttcgcctccttcggcgcgcatcctgatttc
ggcgttgcgctggagcgtaccgtcaccgagctgttgcagggccgtgggctgaaagatctt
gatgtctttaccccgccaacgttcgacgacgaagaagtggctgaacatactaaccttgag
acgcacttcattgactccagcggtttgatctcctgggatctgttcaagcaggatgccgac
tatccgtttgctgactggagtttctccggcaccacggaagaagagttcgccacgctgatg
gcaatcttcaatgcggaagataaagaggtctatattgccgactatgagcacctcggcgtt
tatgcctgccgcattattgtgccgggcatgtctgatatttatccggcagaagatctgtgg
ctcgccaacaacagcatgggaagccatctgcgcgaaaccctccttgccctgccgggcagc
gcatgggagaaagaggcttacctcaatctgattgaacaattagatgaagaaggctttgat
gactttacccgcgtgcgcgagttacttggtctggcgacaggcccggataatggctggtat
accctgcgcatcggtgagcttaaagcaatgctggcgctggctggcggcgatctggagcag
gcgctgatctggacagagtggacgatggaattcaacgcctccatctttagcgctgaacgt
gcgaactactaccgctgtctgcaaacgctgctgcttctggcgcaggaagaagaccgcgaa
ccgctgcaatacctgaatgctttcgttcggatgtatggcgccgaagctgttgaagcggcc
agcgcggcactgagtggcgaagcggcattttatgggctgcaagcggttgatagcgatctg
catgctttcgcctcacatcagtctctgctgaaagcctatgagaaattgcagcgcgccaag
gccgctcactggtcaaaatag
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