Citrobacter sp. TBCP-5362: FD428_14445
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Entry
FD428_14445 CDS
T10692
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FD428_14445 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciq03400
]
FD428_14445 (uvrB)
DNA repair and recombination proteins [BR:
ciq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FD428_14445 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FD428_14445 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
IF2_N
SBDS_domain_II
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCQ72146
LinkDB
All DBs
Position
complement(3017931..3019952)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTIQR
YTIYPKTHYVTPRERIVQAMEEIKDELVDRRRIMLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMFRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGEVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRLRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQLYNEEHGIVPQGLNKKVVDILALG
QNIAKTKAKGKGKSRAAAKSGVVEMDMTPKALQQKIHELEGQMMQHAQNLEFEEAAEIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcttttaaaccttcaggcgatcagccggaggcg
atacgtcgtctggaggaaggtcttgaagatggtctggcgcaccagacgctgttgggcgta
acgggatcagggaaaacgttcaccatcgccaatgtgattgccgatttacagcgcccgacg
atggtgcttgcgcccaataaaacgctggcggcccagttatacggcgaaatgaaagagttc
ttccctgacaacgcggtggaatatttcgtctcttactatgactactatcagccagaggcg
tatgtgcccagctccgacacctttatcgaaaaagatgcgtcggtgaacgaacacatagaa
cagatgcgactgtcggcgaccaaggcgctgcttgagcggcgggacgttgtggtcgtggct
tcggtttccgctatctacggtctgggcgatcccgatttatacctgaagatgatgctgcac
ctgacggtggggatgatcatcgatcagcgcgctatcctgcgccgtctggcggagttgcaa
tatacccgcaacgatcaggccttccagcgcggcactttccgcgtacgcggcgaggtcatc
gacatcttcccggcagagtctgacgatattgcgctgcgggttgagctgtttgacgaagag
gttgaacgtctgtcgctgtttgacccgctgaccgggcaggttgaatcgactatccagcgc
tacaccatctacccgaaaacgcactacgttacgccgcgcgagcgcatcgtacaggcgatg
gaggagatcaaagacgaactggtggacagacgcaggatcatgctggaaaacaataagttg
ctggaagaacagcgcttaacccagcgtacgcagttcgatctggaaatgatgaacgagctg
ggatattgctcggggattgaaaactactcccgctacctttccgggcgcgggcctggcgag
ccgccgccgacgctgtttgactatctgccagccgatggcctgttagtcgtggatgaatct
cacgtcacgattccgcaaatcggcgggatgtttcgtggggacagggcgcgcaaagagacg
ctggtggagtacggtttccgtctgccgtcagcgctggataaccgtccgctaaaatttgaa
gagtttgaagcgctggccccgcaaaccatctacgtttccgccacgccgggcaactatgag
ctggagaaatccggcggcgaggtggtggatcaggtggtgcgtcccaccgggctgctggac
ccgatcattgaagttcggccggtggcgacgcaggttgatgatctgctctctgagatccgc
ctgcgggcggcgattaacgaacgtgtgctggtgacgacgctgaccaagcgaatggcggaa
gatcttaccgaatatctcgaagaacacggcgagcgcgtacgttacctgcactcggacatc
gataccgttgagcgtatggaaatcattcgtgatttgcgtctgggcgagtttgacgtgctg
gtggggatcaacctgttgcgagaagggctggacatgcctgaggtctcgctggtggcgatt
ctggacgcagacaaagaaggcttcctgcgttcagagcgttcgctgattcagaccatcggc
cgtgcggcgcgtaacgtcaacgggaaggcgatcctctatggcgataagatcaccccgtcg
atggcgaaagcgataggcgaaaccgaacgtcgtcgcgagaaacagcagttatacaacgaa
gagcacggtatcgttccgcaggggctgaataagaaagtggtcgatattctggcgttgggt
cagaacatcgcgaaaaccaaagcgaagggcaaagggaagtcccgcgcagcggcgaaatcg
ggtgtggttgagatggatatgacgccgaaagcgttgcagcagaaaattcatgagctggaa
ggccagatgatgcagcatgcgcaaaacctggagtttgaagaagccgcagagattcgcgac
cagctgcatcagctacgtgagctgtttatcgcggcgtcatga
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