Citrobacter sp. TBCP-5362: FD428_15885
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Entry
FD428_15885 CDS
T10692
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq03030
DNA replication
ciq03430
Mismatch repair
ciq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FD428_15885
03430 Mismatch repair
FD428_15885
03440 Homologous recombination
FD428_15885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ciq03032
]
FD428_15885
03400 DNA repair and recombination proteins [BR:
ciq03400
]
FD428_15885
Enzymes [BR:
ciq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FD428_15885
DNA replication proteins [BR:
ciq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FD428_15885
DNA repair and recombination proteins [BR:
ciq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FD428_15885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
ResIII
AAA_2
AAA_16
AAA_30
AAA_14
AAA_7
PIF1
nSTAND3
TsaE
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
QCQ72403
LinkDB
All DBs
Position
complement(3325635..3327560)
Genome browser
AA seq
641 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRHQLEHILNEEHIAHEPRALQLLSRAADGSLRDALSLTDQAIASGDGQVSTLAVSAM
LGTLDDDQALSLVEAVVAANGERVMSLVNDAAARGIEWEALLVEMLGLLHRIAMVQLSPA
ALGNDMAAIEQRMRELARTVPPADIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH
PRMPLPEPERPQQSFAPVAPTAVMTPTQVPSQQSAPVRQEVPLPDATSQVLAARNQLQRA
QGATKTKKSEPAAASRARPVNNAALERLASVSERVQARPAPSALEQTPTKKEAYRWKATN
PVVEVKEVVATPKALKKALEHEKTPELATKLAAEATERDPWAAQISQLSLPKLVEQVALN
AWKEENGNTICLHLRSTQRHLNSTGAQQKLAEALSALTGTTVELTIVEDDNPAVRTPLEW
RQAIYEEKLAQARESIIADNNIQTLRRFFDADLDEESIRPI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtcttagcccgaaaatggcgcccacaaacctttgctgacgtcgtcggc
caggaacatgtgctgaccgcactggcgaacggcttgtcgttagggcgtattcatcacgca
tatcttttttccggcacccgtggcgtcggtaaaacctccatcgcccgtctgctggcgaag
ggactgaactgtgaaaccggtatcaccgccacgccgtgcggcgtatgtgacaactgccgg
gaaatcgagcaggggcgttttgtcgatctgattgagatcgacgccgcgtcgcgcaccaaa
gtggaagatacccgcgacctgctggacaacgtccagtacgcgcccgcgcgcggccgcttt
aaggtctatctgatcgacgaagtgcatatgctctcgcggcacagcttcaacgcgttgctt
aaaacgctcgaagaaccgcctgcacacgtcaaattcctgctggcgaccaccgatccgcag
aagctgccggtgacgattttgtcgcgctgcctgcaattccatctcaaggcgctggatgtc
gaacaaattcgccatcagcttgagcatatccttaacgaagaacatatcgcgcatgagccg
cgcgcgctgcaactgctctcccgcgcagcggacggcagcctgcgcgatgcgctaagcctg
accgaccaggcgatcgccagcggtgacgggcaggtctccaccctggcggtgagcgcgatg
ctcggcacgctggatgatgaccaggcgctttcgctggtcgaggcggtggttgccgccaat
ggcgagcgcgtgatgtcgctggtgaacgatgccgccgcgcgcggtattgagtgggaagcg
ctgctggtcgaaatgctggggctgttgcaccgcattgcgatggtgcagctgtcgcctgcc
gcgctgggtaacgatatggcggcgattgagcagcgcatgcgtgaactggcgcgaactgtg
ccgccagcggacatacagctctattaccagacgctgttgattgggcgcaaagagttgccc
tatgccccggacagacggatgggcgttgaaatgacgctattacgcgcgctggcattccac
ccacgtatgccgctgccggaaccggaaagaccgcagcaatcttttgcgccggtcgcgcca
acggcggtgatgacgccgacgcaggtgccttctcaacaatccgctccggtacgccaggag
gtgccgttgccagatgccaccagccaggtgctggcggcgcgcaaccagcttcagcgtgct
cagggagcaaccaaaacaaaaaagagtgaaccggcagccgcttcccgcgcgcggccggta
aataacgctgcgctggaaagattagcctctgtctctgaacgcgttcaggcgcgtccggcg
ccgtctgcgctggaacagacgccgacgaagaaagaagcctaccgctggaaggcgaccaat
ccggtggtggaagtaaaagaggttgtggccacgccgaaagcgctgaaaaaggcgctggag
catgaaaaaacaccggaactggcgaccaaactggccgcggaagcgactgaacgcgatccg
tgggcggcacaaattagccagctctccctgccgaagctggtggaacaggtggcgttaaac
gcctggaaagaggagaacggcaataccatttgcctgcatctgcgctccacgcagcgacac
cttaactccactggcgcgcagcaaaagctggcggaagcattgagcgccctgacgggaacg
acggttgaactgaccatcgttgaagatgataatccggcggtgcgaacgccgctggagtgg
cgtcaggcgatttatgaagagaaacttgcgcaggcgcgtgagtcgattatcgcggataac
aacattcagacgctgcgtcgattctttgacgcggatctggatgaagagagtattcgcccc
atttga
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