Citrobacter sp. TBCP-5362: FD428_17535
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Entry
FD428_17535 CDS
T10692
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FD428_17535 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciq03019
]
FD428_17535 (pcnB)
Enzymes [BR:
ciq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FD428_17535 (pcnB)
Messenger RNA biogenesis [BR:
ciq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FD428_17535 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
QCQ72717
LinkDB
All DBs
Position
3671765..3673183
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AA seq
472 aa
AA seq
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MTLPRCTIFTRVANFCRKVLNREESEAELAVARPHMTVIPREQHAISRKDISENALKVMY
RLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHEGNDSDRATSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVA
DFTVRDYVGGMQDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAKLDMRISPETAEPIPR
LATLLNDIPPARLFEESLKLLQAGYGFETYKKLREYSLFQPLFPTITRYFTENGDSAMER
IIAQVLKNTDNRIHNDMRVNPAFLFAAMFWYPLLEMAQKIAQESGLAYYDAFALAMNEVL
DEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVENN
AELQRLAQWWGEFQVSAPPDQKGMLNELDEDPAPRRRHRRPRKRAPRREGTA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgacactaccgaggtgcactatttttacccgagtcgctaatttttgccgcaaggtgcta
aaccgcgaggagagcgaggccgagcttgccgtcgcccgtccacatatgacggtaatcccg
cgtgagcagcacgctatttcccgcaaagatatcagtgaaaatgctctgaaagtaatgtac
aggctcaataaagcgggatatgaggcctggctggttggcggcggcgtgcgcgatcttctg
ctcggcaaaaaaccgaaagatttcgatgtcaccaccaacgcaacgccggatcaggtgcgg
aagttgttccgtaactgtcgtctggtgggtcgccgtttccgtctggcgcacgtcatgttc
ggcccggagattatcgaagtggcgacatttcgtggtcaccatgagggcaacgacagcgac
cgcgccacctcccagcgcgggcaaaacggcatgctgttgcgcgataacatcttcggctcc
attgaagaagacgcccagcgtcgtgacttcaccattaacagcctctattacagcgtggcg
gatttcaccgtgcgcgattacgtcggcggtatgcaggatctgaaagacggcgtgattcgc
ctgatcggcaaccctgaaacgcgttaccgcgaagatccggtgcgaatgctgcgtgcagtc
cgtttcgccgcaaaactcgatatgcgcatcagcccggaaaccgcagagccgattccgcgc
ctggcgaccttactcaacgatattccgcccgcgcgtctgtttgaagagtccctgaagctt
ctgcaagcgggatatggtttcgaaacctacaaaaagctgcgtgaatacagcctgttccag
cccctgttccccaccattacgcgttatttcaccgaaaacggcgacagcgcgatggagcgc
atcattgcgcaggtgctgaaaaataccgataaccgcattcataacgacatgcgcgttaac
ccggcgttcttgtttgccgccatgttctggtatccgttgctggaaatggcgcagaaaatc
gctcaggagagcggcctggcctattacgacgcctttgcgctggccatgaacgaggtgctg
gacgaagcgtgccgttcgctggcgatcccgaaacgcctcacaacgttaacccgtgatatc
tggcaactccagttgcggatgtcccgccgccagggcaaacgcgcctggaagctgctggag
cacccgaaattccgcgccgcatacgatctgctggcgttgcgcgccgaggtggaaaacaac
gctgaactgcaacgtctggcgcagtggtggggcgagttccaggtttcagcgccgcccgat
cagaaaggcatgctgaatgagctggatgaagaccccgcgccgcgccgccgccatcgtcgt
ccgcgtaaacgcgcgccacgccgcgagggaaccgcgtga
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