Citrobacter sp. TBCP-5362: FD428_18720
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Entry
FD428_18720 CDS
T10692
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ciq Citrobacter sp. TBCP-5362
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciq03400
]
FD428_18720
DNA repair and recombination proteins [BR:
ciq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
FD428_18720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
TrwB_AAD_bind
ResIII
SLFN-g3_helicase
FtsK_SpoIIIE
AAA_16
AAA
T2SSE
AAA_30
AAA_7
Hydrolase
AAA_25
nSTAND_NTPase5
AAA_18
CbiA
AAA_19
nSTAND3
SRP54
AAA_28
NTPase_1
AAA_6
P-loop_TraG
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
QCQ72940
LinkDB
All DBs
Position
3929624..3931126
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AA seq
500 aa
AA seq
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MSAPLLIARTLESELFLLPGMTNRHGLITGATGTGKTVTLQKLAESLSDIGVPVFMADVK
GDLTGVAQEGEPSEKLLARLKNIGITGWQPHANPVVLWDIFGEKGHPLRATVSDLGPLLL
ARLLNLNEVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASV
GAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGIINILSAEKLYQMPKLYAASLL
WMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFV
SQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGE
ALISFLDTKGSPSVVERAMVIAPCSRMGPVTDDERNGLINHSSLYGKYEDEVDRESAYEM
LQKGVQATTEQQNNPPAKGKEVAVDDGILGGLKEILFGSTGPRGGKRDGVVQSVAKSAAR
QVTNQIIRGMLGSLMGGRKR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcacccctgttaattgcccgcacgctggaaagcgaactgttcctgttgccgggc
atgaccaaccgtcacgggctgattaccggcgcaaccggaaccggcaaaacggttaccctg
caaaaactggctgagtccctatcagacatcggcgttccggtatttatggcggatgtgaaa
ggtgacttaaccggcgtcgcgcaggaaggcgaaccttctgaaaaactgctcgcacggctg
aaaaatatcggcatcaccggctggcaaccgcacgctaatccggtggtgctgtgggatatt
tttggcgaaaaaggtcatccactgcgggcgaccgtctccgatcttgggccgttattgctg
gctcgcctgctgaacctgaacgaggtgcagtccggcgtgctgaatattatcttccgcatc
gccgatgaccaggggctgttgctgctggactttaaagacctgcgggcgatcacgcagtat
atcggtgataatgccaaatccttccagaaccagtatggcaatatcagcagcgcatcggtc
ggggcgatccagcgcgggctgttgtcgctggaacagcagggcgcggcgcacttcttcggc
gaaccgatgctggacatcaaagactggatgcgtaccgatgccaacggcaaaggcattatc
aacatccttagcgccgaaaaactctaccagatgcccaaactgtatgccgccagcctgctg
tggatgctctccgaactgtatgagcaactgccggaagcgggcgatctggaaaaaccgaag
ctggtgttcttcttcgacgaagctcacctgctgttcaacgacgctccgcaggtgttgctg
gataaaatcgaacaggttatccgcctgatccgctccaaaggcgtgggcgtctggttcgtc
tcacagaacccttccgatatcccggacaacgtgctcggtcagctaggcaaccgcgtacag
cacgccctgcgcgccttcacccccaaagatcagaaagcggtgaaagccgccgcgcaaacc
atgcgggcgaatccggcgtttgataccgagaaagcgattcaggaactgggcactggcgag
gcgctaatctccttcctggataccaaaggcagcccatcagtggttgaacgagcgatggtc
atcgcgccgtgctcacgcatggggccggtgacggacgatgagcgtaacgggcttatcaat
cactcctcgctgtacggcaaatatgaagacgaagtcgatcgcgaatcggcgtatgaaatg
ttgcaaaaaggcgttcaggccaccaccgagcagcaaaacaatccgccagcaaaaggcaaa
gaagtcgccgttgatgacggaattcttggcgggctgaaagagatattgtttggcagcacc
gggccacgcggcggcaaacgtgatggtgtggtgcagagcgtcgccaaaagcgcagcgcgt
caggtaacgaaccaaattatccgggggatgttaggtagcctgatgggcggtagaaaacgc
taa
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