Citrobacter sp. TBCP-5362: FD428_18900
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Entry
FD428_18900 CDS
T10692
Name
(GenBank) DgaE family pyridoxal phosphate-dependent ammonia lyase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq00450
Selenocompound metabolism
ciq00970
Aminoacyl-tRNA biosynthesis
ciq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FD428_18900
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FD428_18900
Enzymes [BR:
ciq01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
FD428_18900
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Motif
Pfam:
SelA
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QCQ72975
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Position
complement(3973556..3974674)
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AA seq
372 aa
AA seq
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MTSIYEKYNLKQVINTSGRMTALGVSTPRPEVVQAAMDGMNQYFEMKDLVNKTGEYIAKL
LDVEGATVVSCASAGIAQSVAAVLVQDSDWLLENLHVTPIENNEIVLPKGHNVNFGAPVG
TMVALGGGKLVEAGYANECSAAQLAAAITPRTAAILYIKSHHCVQKSMLSVEQAAVVART
HNLPLIVDAAAEEDLQCYYRVGADLVIYSGAKAIEGPTSGLVIGKTQYVEWVKRQTAGIG
RAMKVGKEGILGLTCAIELYLNAQKESGAEMVEKMTPFIDALNALNGVSARVVWDSAGRD
IARTEIKFDEAVTGIATGDLVEALKQGEYAIYFRGYKANEGIIEADVRSVNQAQLEIVAR
RIRDVINQEKKA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcgatttatgaaaaatacaatctgaaacaagtgattaatacatcagggcgcatg
accgcgctcggtgtttccaccccgcgcccggaagtggtgcaggcggcaatggatggcatg
aaccagtactttgagatgaaagatctggtcaataaaaccggggagtacattgcaaaactg
ctggatgtggaaggggcgacggtcgtctcctgcgcctcggcggggattgcccagtcggta
gcggcggtactggttcaggacagcgactggctgctggaaaacctgcatgttactccgatc
gagaataacgaaattgtattgccgaaagggcacaacgttaactttggcgcgccggttggc
acgatggtggcgctgggcggcggtaagttggtcgaagccggttatgccaacgaatgttcc
gcagcgcagcttgcggcggcgatcactccgcgcacggcggcgatcctctatatcaaatct
caccactgcgtgcagaaaagcatgctcagcgtagagcaggcggcggtagtcgcgcgcacg
cacaatttaccgttgattgtggatgcggcggcagaagaggatttgcagtgttactaccgc
gtcggcgcggatctggtgatctacagcggcgcgaaagcgattgaagggccgaccagcggt
ctggtgatcggtaaaactcagtacgtcgagtgggtgaaacgccagacggcgggcattggc
cgcgccatgaaagtcggcaaagagggcatcctcgggctgacctgcgccatcgaactctac
ctgaacgcgcagaaagagagcggcgcggagatggtcgaaaaaatgacgccgtttattgat
gcgctgaatgcgcttaatggcgtgagcgcccgcgtggtgtgggacagcgctggacgcgat
atcgcgcgaacggaaattaaattcgatgaggccgtgaccggcattgccaccggcgatctg
gtggaagccctcaaacagggtgagtacgccatctatttccgtggctacaaagctaacgaa
ggcattattgaggcggatgtccgcagcgtaaatcaggcgcaactggagattgtggcacgc
cgcattcgcgatgtgattaatcaggagaaaaaagcatga
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