Citrobacter sp. TBCP-5362: FD428_19260
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Entry
FD428_19260 CDS
T10692
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FD428_19260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciq03019
]
FD428_19260
03009 Ribosome biogenesis [BR:
ciq03009
]
FD428_19260
Messenger RNA biogenesis [BR:
ciq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FD428_19260
Ribosome biogenesis [BR:
ciq03009
]
Eukaryotic type
Pre-60S particles
RNases
FD428_19260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QCQ73043
LinkDB
All DBs
Position
complement(4043502..4044047)
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AA seq
181 aa
AA seq
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MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSAEQLALMDD
WNVRTHTGSGLVDRVKASSFDDRAAELATIEFLKEWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILAGFTKQGTHQAMDDIRESVAELAYYRENFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaatgaaaacaacctcatttggatagatcttgagatgaccggcctggatccc
gagcgcgatcgcattattgagatcgcgacgctggtgaccgatgccaacctgaatatcctg
gcggaagggccgacgattgcggtgcatcagtctgctgaacaactggcgttaatggatgac
tggaacgtgcgtacccataccggaagtggtctggtggatcgggtaaaagccagctcgttt
gacgatcgcgccgcagaactggcgaccattgaatttttaaaagagtgggttccggcaggt
aaatcaccgatttgtggcaacagcatcggccaggatcgccgttttctgtttaagtacatg
cctgaactggaagcctatttccactatcgctatctggatgtgagtacgctgaaagagctg
gcgcgtcgctggaagccggaaatccttgccggttttaccaagcaggggacgcaccaggcg
atggatgatattcgcgagtcggtggcggagctggcttattaccgcgagaattttattaag
ctgtaa
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