Citrobacter sp. TBCP-5362: FD428_19370
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Entry
FD428_19370 CDS
T10692
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FD428_19370 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciq03019
]
FD428_19370 (groL)
03110 Chaperones and folding catalysts [BR:
ciq03110
]
FD428_19370 (groL)
03029 Mitochondrial biogenesis [BR:
ciq03029
]
FD428_19370 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ciq04147
]
FD428_19370 (groL)
Enzymes [BR:
ciq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FD428_19370 (groL)
Messenger RNA biogenesis [BR:
ciq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FD428_19370 (groL)
Chaperones and folding catalysts [BR:
ciq03110
]
Heat shock proteins
HSP60 / Chaperonin
FD428_19370 (groL)
Mitochondrial biogenesis [BR:
ciq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FD428_19370 (groL)
Exosome [BR:
ciq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FD428_19370 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FD428_19370 (groL)
Exosomal proteins of breast cancer cells
FD428_19370 (groL)
Exosomal proteins of colorectal cancer cells
FD428_19370 (groL)
Exosomal proteins of bladder cancer cells
FD428_19370 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QCQ73064
LinkDB
All DBs
Position
complement(4063226..4064872)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKTLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVTQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKIAELKGQNEDQNVGIKVALRAMESPLRQIVLNCGEEPSVVANTVKSGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagacgcagtgaaagtgaccctcggtccgaaaggccgtaacgtggttctg
gataaatctttcggtgcgccgaccatcactaaagatggtgtttccgtagcgcgtgaaatc
gagctggaagacaagttcgaaaacatgggcgcgcagatggtgaaagaagttgcctctaaa
gcgaacgacgcggcaggcgacggcaccaccaccgcgaccgtactggctcagtccatcatc
actgaaggtctgaaagccgttgctgcgggcatgaacccgatggatctgaaacgtggtatc
gacaaagcggttgctgctgcggttgaagaactgaaaaccctgtccgtaccgtgctctgat
tctaaagccattgctcaggttggtactatctccgctaactccgacgaaaccgtaggtaaa
ctgatcgctgaagcgatggacaaagtcggtaaagaaggcgtgatcaccgttgaagacggt
actggtttgcaggatgagctggacgtggttgaaggtatgcagttcgaccgtggctacctg
tctccttacttcatcaacaagccggaaactggcgcagtagaactggaaagcccgttcatc
ctgctggctgataagaaaatctccaacatccgcgaaatgctgccagttctggaagccgtg
gccaaagcaggtaaaccgctgctgatcatcgctgaagacgttgaaggcgaagcgctggcg
accctggtggttaacaccatgcgcggcatcgtgaaagtggctgcggttaaagcaccgggc
ttcggcgaccgccgtaaagcgatgcttcaggatatcgcaaccctgaccggcggtaccgtt
atctctgaagagatcggtatggaactggaaaaagccaccctggaagacctgggccaggcg
aaacgcgttgtgatcaacaaagacaccaccaccatcatcgatggcgtgggtgaagaagcg
gcaatccagggtcgtgtgactcagatccgtcagcagatcgaagaagctacttccgactac
gaccgtgaaaaattgcaggaacgcgtagcgaaactggcaggcggcgtggccgtgattaaa
gtcggtgctgcgaccgaagttgaaatgaaagagaagaaagcccgtgttgaagatgccctg
cacgcaacccgtgctgcggtagaagaaggcgtggttgccggtggtggcgtagcgctaatt
cgcgtcgcgtctaaaattgcggaactcaaaggccagaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcaatggaatccccgctgcgtcagatcgtgctgaactgcggcgaa
gaaccgtctgttgtggctaacaccgttaaaagcggcgacggcaactacggttacaacgca
gcaaccgaagaatacggcaacatgatcgatatgggtatcctggacccgaccaaagtaacc
cgttctgctttgcagtacgcggcatccgtggctggtctgatgatcactaccgagtgcatg
gtaactgacctgccgaaaggcgatgctcctgacttaggcgcagccggcggcatgggcggt
atgggtggaatgggcggcatgatgtaa
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