Citrobacter sp. TBCP-5362: FD428_20615
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Entry
FD428_20615 CDS
T10692
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FD428_20615 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciq03400
]
FD428_20615 (priA)
Enzymes [BR:
ciq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FD428_20615 (priA)
DNA repair and recombination proteins [BR:
ciq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FD428_20615 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
WHD_PriA
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QCQ73285
LinkDB
All DBs
Position
4340637..4342835
Genome browser
AA seq
732 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERVGIVVSVSEQSELPLNEL
KAVVEVLDSEPVFSPSVWRLLLWAADYYHHPMGDVLFHALPILLRQGKPASNAPMWYWFA
TEDGHAIDLNSLKRSPKQQQALAALRQGKIWRDQVADLEFNDAALQALRKKGLCELASET
PGFSDWRTHYAVCGDRLRLNTEQATAVGAIHSASDSFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVRQKKYRMLRLTRRAGNARPALQHVLDLKGQKIQAGLAPALIARMHQHLQADNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPIPRQCPSCG
STHMVPVGLGTEQLEQALAPFFPGVPVSRIDRDTTSRKGALEQHLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTHH
PEHPLLQTLLHKGYDAFAEQALAERQTLQLPPWTSHVIVRAEDHNNQQAPVFLQQLRNLI
QASPLADDKLWVLGPVPALAPKRGGRYRWQILLQHPSRIRLQHIVSGTLALINTLPDSRK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgcgcacgttgccttgcccgttccgctaccccgcacctttgactatctcttg
ccagaaggcatgaccgtcaaagccgggtgtcgggtgcgcgtgccgtttggcaaacagcag
gaacgcgtcgggattgtggtgtcggtcagcgagcaaagcgaactgccgcttaacgaactg
aaagcggtcgttgaggtactggacagcgagccggtcttttcaccctccgtctggcgtttg
ctgctttgggcggcggattactaccaccatccaatgggtgacgttctgtttcacgctctg
ccgattttgctgcgccaggggaaacccgccagcaacgcgccgatgtggtactggtttgcc
accgaagacggccacgctatcgatctcaatagcctgaagcgttcgcctaaacagcaacag
gcgctggccgcgctgcggcaggggaaaatctggcgcgaccaggtggcggatcttgaattt
aatgacgcggcgctccaggcgctgcgtaaaaaaggactgtgcgagctggcgagcgaaacg
cccggctttagcgactggcgcacccattacgccgtctgtggcgatcggctgcgtctcaat
accgaacaggccaccgccgttggcgccatccacagcgcgtcggacagcttttctgcctgg
ctgctggcaggcgttacgggttccggtaaaacagaggtctatctcagcgtactggaaaac
gtcctcgctcagggcaaacaggcgctggtgatggtgccggaaattggcctgacgccgcaa
accatcgcccgctttcgcgagcgcttcaacgcccccgtcgaagttctgcactccgggtta
aatgacagcgaacgtctctcagcctggctgaaagccaaaaacggcgaggcggcgattgtc
atcggcacccgctcatcgttgtttacgccgtttaaaaacctcggcgtcattgtgatcgac
gaagagcatgatagctcctataagcagcaggaaggctggcgttaccacgcccgcgacctg
gcggtataccgcgctcacagcgaacaaatcccgattattctcggctcggcaacaccggcg
ctggagacgttatgcaacgtgcgacaaaaaaagtaccgcatgctgcgcctgacgcgccgg
gcaggcaacgcacgccctgccctccagcatgtgctggatttaaaaggccagaagatccag
gccgggctggctcccgcgcttatcgcccgtatgcatcagcacctgcaggcagataaccag
gtcattctcttccttaaccgccggggatttgctcctgcgctgttatgccacgactgcggc
tggattgccgaatgtccgcgctgcgatcactattacacgttgcaccaggcgcaacaccac
ctgcgctgtcaccattgcgacagccagcgcccgataccgcgtcagtgcccttcctgcggc
tccacgcatatggtgccggttgggttagggacagaacagcttgagcaggcgttggcgccc
ttctttcccggcgtgccggtctcgcgcatcgaccgcgacaccaccagccgtaaaggcgcg
ctggagcagcatctggcggaagtccatcgcggcggcgcgcgcattttgatcggcacgcaa
atgctggcgaaagggcaccatttcccggacgtcaccctggtagcgctgctggacgttgac
ggcgcgctgttctcggcggatttccgttcggcggaacgttttgcccagctttacactcag
gtttccggccgcgccggacgcgccggaaaacagggcgaggtggtattgcagacccaccat
ccagagcaccctttgctgcaaaccttgctgcacaaaggctatgacgcttttgctgaacag
gcgctggccgagcggcaaacgctgcaacttccgccgtggaccagccatgtgattgtacgg
gcggaagatcataacaaccagcaggcgccagtgttcctgcaacagctgcgtaatctgatt
caggccagcccgcttgcggatgacaagctctgggtattaggcccggtgcctgcgctcgcg
ccaaaacgcggcggccgctaccgttggcaaattttgttgcagcatccgtcgcgaattcgt
ctgcaacatatcgtcagcggcacgctggcgctcatcaatacgctacccgattcccgcaag
gttaaatgggtgctggatgtcgatcccattgagggataa
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