Citrobacter sp. TBCP-5362: FD428_21070
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Entry
FD428_21070 CDS
T10692
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq00071
Fatty acid degradation
ciq00280
Valine, leucine and isoleucine degradation
ciq00310
Lysine degradation
ciq00362
Benzoate degradation
ciq00380
Tryptophan metabolism
ciq00410
beta-Alanine metabolism
ciq00640
Propanoate metabolism
ciq00650
Butanoate metabolism
ciq00907
Pinene, camphor and geraniol degradation
ciq00930
Caprolactam degradation
ciq01100
Metabolic pathways
ciq01110
Biosynthesis of secondary metabolites
ciq01120
Microbial metabolism in diverse environments
ciq01200
Carbon metabolism
ciq01212
Fatty acid metabolism
Module
ciq_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
FD428_21070 (fadB)
00650 Butanoate metabolism
FD428_21070 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
FD428_21070 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
FD428_21070 (fadB)
00310 Lysine degradation
FD428_21070 (fadB)
00380 Tryptophan metabolism
FD428_21070 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FD428_21070 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
FD428_21070 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
FD428_21070 (fadB)
00930 Caprolactam degradation
FD428_21070 (fadB)
Enzymes [BR:
ciq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
FD428_21070 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
FD428_21070 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
FD428_21070 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
FD428_21070 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QCQ73369
LinkDB
All DBs
Position
4437352..4439541
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGQALDVLEKQTDLKGLLLRSN
KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLSAINGYALGGGCEC
VLATDYRLVTPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDIGAEQALK
IGLVDGVVKPEKLLDGAIAVLRQAIDGSLDWKAKRQPKLEPLKLSKIEAAMSFTIAKGMV
AQTAGKHYPAPMTAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQFVK
GKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLTLGMTEAAKLL
NKQLERGRIDGLKLAGVISTIHPTLNYAGFDRVDVVVEAVVENPKVKKAVLAETEDNVRP
DTVLASNTSTIPISELASALKRPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDASRYGQKNGLGFWRYKEDSKGKP
KKEEDAAVDSLLAEVSQPKRDFSDEEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPA
RPVGDLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaaaggcgacaccctgtacctcgactggctggaagatggcatcgccgaactg
gtgttcgatgccccaggatcggtcaataaactcgacactgcgaccgtcgccagcctcggc
caggcgctggacgtgctggaaaagcaaacagatttaaaagggctgctgctgcgctctaac
aaagcagcctttattgtcggtgctgatatcaccgaattcctttcgctgttccttgttcct
gaagaacagttaagccagtggctgcactttgccaatagcgtctttaatcgcctcgaagat
ttaccggtgccaacgctttccgccatcaacggctatgcgctgggcggcggctgcgagtgc
gtactggcaaccgattatcgtctggtgacgccggatctgcgcattggcctgccggaaacg
aagctgggcatcatgccgggctttggcggttctgtccgtatgccgcgtatgctgggcgct
gacagcgcgctggaaattattgctgccgggaaagacatcggcgctgagcaggcgctgaaa
atcggcctggttgacggtgtcgtgaaaccggaaaaactgcttgatggcgcaatagcggta
ttacgtcaggcgattgacggctcactggactggaaagctaaacgccagccgaagctggaa
ccgttgaagctcagtaaaattgaagcggcgatgagctttaccatcgccaaaggcatggtg
gcgcagacggccgggaagcattaccccgccccgatgaccgccgtgaaaacgatcgaagcc
gccgcacgctttggccgtgaagaagcgctgaatctggaaaataaaagctttgtcccgctg
gcgcataccaatgaagcccgcgcgctggtcggtatcttcctcaacgatcagttcgtgaaa
ggtaaagcgaaaaagctgaccaaagacgttgaaacaccgaagcaggcagccgtactgggc
gcaggtattatgggcggcggcatcgcttaccagtcagcctggaaaggcgtgccggtgatc
atgaaagatatcaacgacaaatccctgacgctgggcatgaccgaagcggcgaaactgctg
aataagcagctggaacgcggcaggatcgacggcctgaaactggcgggcgtgatttcaacg
attcacccaacgctgaactacgccggttttgatcgcgttgatgtagtggtcgaagcggta
gtggaaaacccgaaagtgaagaaagcggtactggcggagaccgaagacaacgtccgcccg
gataccgtgctggcgtcaaatacgtccaccattccaattagtgaactggcaagcgcgctg
aagcgcccggaaaacttctgcggcatgcacttctttaacccggtacaccggatgccgctg
gttgaaatcattcgcggcgagaaaagctcggatgaaaccatcgctaaagtcgtcgcctgg
gccagcaaaatgggcaaaacgccgattgtggtcaacgactgccccggcttctttgttaac
cgcgtactgttcccgtattttgccggtttcagccagctactgcgcgacggcgccgatttc
cgcaaagtcgacaaagtgatggagaaacagtttggctggccgatgggcccggcttatctg
ctggatgtggtcgggattgataccgcgcatcatgcgcaggcagtcatggcggccggtttc
ccacagcgtatgcagaaagattatcgtgatgccatcgacgcgctgtttgacgccagccgc
tatggtcagaaaaacggtctcggcttctggcgctataaagaagacagcaaaggcaagccg
aagaaagaagaagatgcggccgtagacagcctgctggcagaggtcagccagccgaagcgc
gacttcagcgacgaagagattatcgcccgcatgatgattccgatggtcaacgaagtggtg
cgctgtctggaagaaggcatcatcgccagtccggcagaagcggatatggcgctggtttac
ggtctgggcttccctccgttccacggcggcgcgttccgctggctggatacgctcggcagc
gcaaaatatctcgatatggcgcagcagtatcagcacctcggcccactctatgaagtgccg
gaaggtctgcgtaacaaagcgcgccataacgaaccatactatcccccggttgagccagcc
cgcccggttggcgacctgaaaacggcttaa
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