Citrobacter sp. TBCP-5362: FD428_21185
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Entry
FD428_21185 CDS
T10692
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FD428_21185 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciq03019
]
FD428_21185 (recQ)
03400 DNA repair and recombination proteins [BR:
ciq03400
]
FD428_21185 (recQ)
Enzymes [BR:
ciq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FD428_21185 (recQ)
Messenger RNA biogenesis [BR:
ciq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FD428_21185 (recQ)
DNA repair and recombination proteins [BR:
ciq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FD428_21185 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QCQ73390
LinkDB
All DBs
Position
complement(4461600..4463429)
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVLNLELGAKQVLQETFGYQQFRPGQEEIIETVVSGRDCLVVMPTGGGKSLCYQIP
ALLLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQHEVMAGCRTGQVRLLY
IAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPSLPFMAL
TATADDTTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRDLAHDKLPVYGIGRDQSHEHWVSVIRQLIHLG
MVTQNIAQHSALQLTEAARPVLRGEVPLQLAVPRIVALKPRVMQKSFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPVSPSEMLSVNGVGMRKLERFGKEFMALIR
AHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtgttgaatctggaattgggggctaaacaggttttacaggaaacc
tttggctaccaacagtttcgcccaggccaggaagagatcattgagacggtcgtctcgggt
cgtgattgcctggtcgtcatgccgaccggcggcggcaaatccctgtgttaccagattcca
gccttactgcttaacggactcaccgttgtcgtttcgccgcttatctccctgatgaaagat
caggttgaccagctgctggcaaacggcgtggcggcggcgtgcctgaactcgacgcagagc
cgtgaacagcagcatgaggtgatggccggttgccgaaccgggcaggttcgcctgctgtat
attgcaccggagcgcctgatgctggataacttccttgagcatctggcgcactggaacccg
gtcttactggccgtcgatgaagcgcactgtatctcgcagtgggggcatgacttccgcccg
gaatacgccgcgctcggtcagctccgccagcgttttccttccctgccgtttatggcgttg
accgccaccgcagatgacaccacccgactggatattgttcgcctgctggggctgaacgat
ccgttaatccagatcagcagctttgaccgtccgaacattcgctacatgctgatggagaaa
tttaagccgctcgatcagctgatgcgctatgtgcaggaacagcgcggcaagtccggtatc
atctactgtaacagccgggcgaaggtggaggacaccgccgcacgtctgcaaagtcgcggc
atcagcgcggcggcgtatcatgccggtctggaaaataacgtgcgcgccgatgtgcaggag
aagttccagcgcgacgatctgcaaatcgtcgtggcgaccgtcgcatttggtatgggcatt
aacaaacctaacgtgcgttttgtggtgcattttgatattccccgcaatattgaatcctac
tatcaggaaaccggccgcgccgggcgtgacggcctgcccgcagaggcgatgctgttctac
gatccggctgatatggcgtggctgcgccgctgtctggaggagaaacccgccgggcagcta
caggatattgaacggcataagctgaacgcgatgggggcgtttgccgaagcgcagacctgt
cgtcgtctggtgctgctgaactactttggcgaaggtcggcaggaaccctgcggcaactgc
gatatttgcctcgacccgccaaaacagtacgacggcctgatggatgcgcgtaaagccctg
tcgacgatttatcgcgttaatcagcgttttggtatgggctatgtggtggaagtattgcgc
ggcgcgaacaatcagcgtatccgcgatttagctcatgacaaattgccggtgtacggcatt
ggtcgcgatcagagccatgagcactgggtcagcgtgattcgtcagcttattcatctgggt
atggttacgcagaatattgcccaacattcggcgttgcagttaaccgaagcggcgcgtccg
gtgctgcgtggcgaagtgccgttgcagcttgccgtgccgcgtatcgtcgcgttgaagccg
cgagtgatgcagaaatccttcggcggcaattacgatcgcaaactgttcgccaaactgcgc
aaattgcgtaaggccattgccgatgaagagaatatcccgccgtatgtcgtctttaacgat
gcgacgctgattgaaatggccgaacagatgccggtttcgccgagcgaaatgctgagcgtt
aacggcgtcggcatgcgcaagctggagcgtttcggtaaagagtttatggcgctgatccgc
gcgcatgtcgatggtgacgacgaagagtag
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