Citrobacter sp. CFNIH10: C2U53_00220
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Entry
C2U53_00220 CDS
T05324
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cir
Citrobacter sp. CFNIH10
Pathway
cir03030
DNA replication
cir03430
Mismatch repair
cir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2U53_00220
03430 Mismatch repair
C2U53_00220
03440 Homologous recombination
C2U53_00220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cir03032
]
C2U53_00220
03400 DNA repair and recombination proteins [BR:
cir03400
]
C2U53_00220
Enzymes [BR:
cir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2U53_00220
DNA replication proteins [BR:
cir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2U53_00220
DNA repair and recombination proteins [BR:
cir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2U53_00220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF7079
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AUZ62421
LinkDB
All DBs
Position
pKPC-2fe2:24789..25637
Genome browser
AA seq
282 aa
AA seq
DB search
MKNDELATRRAEAIAGDRCFTKGRLRDEFRMKPAPGAEPVKWYKSAYGGKYAVYRIADCV
PMREKRPPTEKQQLAGLRLSVLSRLNSTSGRMARRAHDWLSLAPLFLDTETTGLGNTAEA
LEIGLTDAAGRVIFETRLKPTVAIEAQAAAVHGIDEPALSGAPSWPDVALQLRHAIGARP
VIIFNAPFDTRILKQTAAAHGDPADWLGELTVYCAMELAAGYFGATNRYGTISLASAASQ
AALAWEGEAHSAIADARMTAGVVNAIAAYHLALLQEQERLQG
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgatgagctggccacacgacgcgctgaggcgatagccggcgatcggtgcttc
acgaaagggcgcctgcgcgatgaattcagaatgaagccggctcccggtgctgagccggtg
aaatggtacaaaagcgcctatggcggcaagtacgccgtataccgcattgcagactgtgtt
ccgatgcgggaaaaacggccgccgactgagaagcagcagctggccggcctgcgtctttcc
gtcctgtcccggcttaacagcaccagtggccggatggcacggcgggcacacgactggctg
agtctggcgccgctctttctggataccgaaacgacggggctgggtaataccgcggaagcg
ctggaaatcggcctgaccgatgcggccggccgggtgatatttgaaacccgcctgaagccg
acggtcgccatcgaggcgcaggccgccgccgtgcatggtatcgatgagccggcactcagc
ggcgcaccatcctggccagatgtggcgctgcagctgcgccacgccatcggggcccggcca
gtgattatctttaacgccccctttgatacccgcattctgaaacagacggccgccgcacat
ggcgatccggccgactggctgggagaactgacagtgtattgcgcgatggagctggcagca
gggtattttggggccaccaatcgctatggcaccatttcgctggccagtgcggccagtcag
gcagcattggcctgggaaggggaggcacactcggcgatcgccgatgcacggatgacggct
ggggtggtgaacgccattgccgcataccatctggcattgctgcaggagcaggaacggctg
cagggctga
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