Citrobacter sp. CFNIH10: C2U53_03955
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Entry
C2U53_03955 CDS
T05324
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
cir
Citrobacter sp. CFNIH10
Pathway
cir00310
Lysine degradation
cir01100
Metabolic pathways
cir01110
Biosynthesis of secondary metabolites
cir01120
Microbial metabolism in diverse environments
Module
cir_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
C2U53_03955
Enzymes [BR:
cir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
C2U53_03955
SSDB
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Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AUZ63059
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All DBs
Position
complement(129046..131184)
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AA seq
712 aa
AA seq
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MNIIAIMGPHGVFYKDEPINELERALQSQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSEINQLNEYLPLYAFINTHSTMDVSVHDMRMALWFFEYALGQAEDIATRIRQY
TNEYLDNITPPFTRALFTYVKEGKYTFCTPGHMAGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPTGSTLLI
DRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGIPKREFTRESIANKVATTAQAQWPVH
AVITNSTYDGLLYNTNWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIF
ETQSTHKMLAALSQASLIHIKGDYDEETFNEAFMMHTSTSPSYPIVASIETAAAMLRGNS
GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPEEVDEAACWPVAPGEDWHGFTDAD
DDHMFLDPVKVTILTPGMNEQGEMSDEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLTEFKRSYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQH
DLSGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETVPLDQLVGRVSANMILPYPPGVPLLM
PGEMLTEQSRAVLDFLLMLCSIGQRYPGFETDIHGAKQDNDGVYLVRVLKTA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatcgccattatggggccgcacggggttttttataaagacgagcccattaac
gagcttgagcgtgcgctgcaatcacagggatttcagattatctggccgcaaaacagcgtc
gacctgctgaaatttatcgaacacaacccgcgcatttgtggggtgatttttgactgggat
gagtacagtctcgatttgtgcagtgagattaaccagctcaatgagtatttaccgctgtat
gcgtttatcaacacgcattcgacgatggatgtcagcgttcacgacatgcgcatggcgcta
tggtttttcgagtatgcgctcgggcaggcggaagatatcgcgacgcgcattcgccagtac
accaacgagtacctcgacaatatcacgccgccttttaccagagcgctgttcacctatgtg
aaagaggggaaatacaccttctgcacgccgggtcacatggccggaacggcctatcaaaaa
agtccggttggctgcctgttctatgactttttcggtggcaataccctgaaagcggatgtg
tcgatatcagtcactgaactgggttcgttactcgatcacaccgggccacatctggaggct
gaagagtatatcgcccgaacgttcggcgcagagcagagttatatggtgactaacggcacc
tccacctcaaacaaaattgtggggatgtatgccgcgccaaccggcagtacgctgttgatt
gaccgtaactgccataagtcgctcgcgcatttgttgatgatgagcgacgtcgtgccgatc
tggctgaaaccaacgcgtaatgcgctcggtattctgggcggcattccgaagcgtgagttc
acgcgcgagagtattgcgaacaaagttgccaccacggcgcaggcgcagtggccagttcat
gccgtgatcactaactcgacctatgacggcctgctgtataacactaactggatcaaacag
acgctggatgtcccttctatccacttcgattctgcctgggtgccctatacccactttcat
cccatttatcaggggaaaagcgggatgagcggtgaacgggtgcctggcaaggtgattttc
gaaacgcaatccacccacaaaatgttggcggcgctatcgcaggcgtcgctgattcatatt
aaaggggattatgacgaagagaccttcaacgaagcgtttatgatgcacacctcgacctcg
ccgagttatccgattgtcgcctccatcgagacggcggcagcgatgctgcggggaaattcc
ggtaagcgattaatcaatcgctctgtggagcgcgcgttacattttcgcaaagaagtgcag
cggctacgtgaagagtctgacggttggttctttgatatctggcagccggaagaggttgat
gaagccgcgtgctggccggtggcacccggtgaagactggcacggatttaccgatgccgac
gatgaccatatgttcctcgatccggtaaaagtcacgatcctgacgcccggtatgaacgag
caaggggagatgagtgacgaggggatccccgccgcgctggtggcgaaattccttgatgag
cgcggcgtggtggtggagaaaaccgggccgtacaatctgctgtttctcttcagtattggt
atcgataaaacccgggcaatggggctgttgcgtggactgaccgaatttaaacgctcttac
gatctcaatttgcgcgtgaagaatatgctgccggatctgtatgcagaagatcctgatttt
tatcgcaacatgcgtattcaggatctggcgcaagggatccacaagctcatccgccaacac
gatctttccggtctgatgctgcgtgcgtttgatacattgccggaaatgatcatgacgccg
catcaggcctggcagcgacagatcaaaggcgaagtcgaaacggtccccctcgatcaactg
gtgggacgcgtgtcggcgaatatgatcctgccataccctcccggcgttccgctgctgatg
ccgggagaaatgctcaccgagcagagtcgcgccgtactcgattttctgctgatgctctgt
tctattggtcagcgttatccgggctttgaaacggatattcacggggcgaaacaggataac
gacggcgtatacctcgtacgagtcttaaaaacggcatga
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