Citrobacter sp. CFNIH10: C2U53_06505
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Entry
C2U53_06505 CDS
T05324
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cir
Citrobacter sp. CFNIH10
Pathway
cir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2U53_06505 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cir03019
]
C2U53_06505 (pnp)
03016 Transfer RNA biogenesis [BR:
cir03016
]
C2U53_06505 (pnp)
Enzymes [BR:
cir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C2U53_06505 (pnp)
Messenger RNA biogenesis [BR:
cir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C2U53_06505 (pnp)
Transfer RNA biogenesis [BR:
cir03016
]
Prokaryotic type
tRNA degradation factors
C2U53_06505 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
aRib
OB_RRP5_4th
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AUZ63524
LinkDB
All DBs
Position
complement(670382..672517)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIKEINELVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDESLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTTR
DAQSLDELMGERTDNFLFHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPDLDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPVSEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggtcagcataccgttacgctggaaacc
ggcatgatggcccgtcaggccactgccgctgttatggttagcatggatgacacggcggta
ttcgtgaccgttgtcggccagaaaaaagcgaagccgggtcaggacttcttcccgctgacc
gttaactatcaggagcgtacctacgctgctggccgcatcccaggtagcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaactctgatcgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggtttcgtgaacgaagttcaggttatcgcaaccgtcgtttccgtt
aacccgcaggttaacccggatatcgtcgcgatgatcggtgcctctgctgcactgtctctg
tctggtattccgttcaacggcccaatcggtgcggcacgtgtgggttatatcaatgaccag
tacgtactgaacccgactcaggacgagctgaaagagagcaaactggatctggtcgttgcc
ggtacggaagccgccgtactgatggttgaatccgaagcagaactgctgagcgaagaccag
atgctgggtgctgtcgtgtttggtcacgaacagcagcaggtggttatcaaagaaatcaac
gaactggtgaaagaagccggtaaaccacgttgggactggcagccggaagcggtgaacgaa
gcgctgaacgcgcgcgttgcagccctggcagaatctcgcctgagcgacgcttaccgtatc
accgacaaacaagagcgttatgctcaggttgacgtgatcaagtctgaaaccatcgcaacg
ctggttgcagaagatgagtccctggacgctaacgaactgggtgaaatcctgcacgcaatc
gagaaaaacgtggtgcgtagccgtgtactggccggcgaaccgcgtattgatggccgcgaa
aaagacatgatccgtggtctggacgtgcgtactggcgtactgccacgtacccacggttcc
gcactgttcacccgtggcgaaactcaggcgctggttaccgcaaccctgggtaccacccgt
gatgcgcagagcctcgacgaactgatgggcgagcgtactgacaacttcctgttccactac
aacttccctccgtactgcgtcggcgaaaccggcatggtcggttctccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtgatgccggatctggataaa
ttcccgtacaccgtgcgtgtggtttctgaaatcaccgaatccaacggttcttcttccatg
gcttccgtgtgtggtgcctctctggcgctgatggacgcaggcgtgccgatcaaagcggcc
gttgcgggtatcgcgatgggtctggtgaaagaaggcgacaactacgttgttctgtctgac
atcctgggcgacgaagatcacctgggcgatatggacttcaaagttgcgggctcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgctctgaaccaggctaaaggtgcgcgtctgcatatcctgggcgtgatggaacaggcg
attaacgcgccacgcggcgacatttctcagtttgcaccgcgtatccacaccattaagatc
agcccggacaaaatcaaagatgtgatcggtaaaggcggttctgtgatccgtgcgctgacc
gaagagactggcaccaccatcgaaatcgaagatgacggtaccgtgaaaatcgcagcaacc
gacggtgaaaaagcgaaatacgcaattcgccgtatcgaagagatcaccgcagaaatcgaa
gtaggccgtatctacaacggtaaagtgacccgtatcgtcgactttggtgcgttcgttgcc
atcggcggcggtaaagaaggtctggtacacatctcgcagatcgcagataagcgcgttgag
aaagtgaccgattacctgcagatgggccaggaagtaccggttaaagttctggaagttgac
cgccagggccgtgtacgtctgagcattaaagaagcaactgaacaatctcagcctgcagcc
gcaccggaagctccggtaagcgaacagggcgagtaa
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