KEGG   Citrobacter sp. CFNIH10: C2U53_06940
Entry
C2U53_06940       CDS       T05324                                 
Name
(GenBank) RNase E specificity factor CsrD
  KO
K18765  RNase E specificity factor CsrD
Organism
cir  Citrobacter sp. CFNIH10
Brite
KEGG Orthology (KO) [BR:cir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cir03019]
    C2U53_06940
Messenger RNA biogenesis [BR:cir03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     C2U53_06940
SSDB
Motif
Pfam: EAL GAPES4 GGDEF
Other DBs
NCBI-ProteinID: AUZ63598
UniProt: A0A3S7D3Q6
LinkDB
Position
complement(756613..758553)
AA seq 646 aa
MRLTTKFSAFVTLLTGLTIFVTLIGCSLSFYNAIQYKMAHRVQAVATAIDTHLVSRDFKQ
LTSQIDELMVSADVVRVDLLQGEKVIYSQTRNSSYRPVGTSNLFRELSVPLMKHPGMTMD
LVYQDPMGNYFHSLMTTAPLTLAIGFIVLMLFLSVRWLQRQLSGQELLEMRSTRILNGER
GASVRGTVYEWPARTSSALDMLLSEIQSAQEQRSRLDTLIRSYAAQDTKTGLSNRLFFDN
QLATLLDDQEKIGAHGVVMMIRLPDFNLLRDSWGRNLAEEELFSLINLLSTFMMRFPGSL
LARYHRSDFAVLLPHRTLKEAESVAGQLLKAVDALPTNKMLDRDDMVHIGICAWRSGQST
EQVMEHAEAATRNAVLQGGNSWTVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAV
TRDGHVHHRELMCRIFDGNEEVSTAEYMPMVLQFGLSEEYDRLQISRVIPLLNYWPEENL
AMQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG
VRVAVTQAGLTLVSTSWIKELNVELIKLHPSLVRNIEKRTENQLLVQSLVEACSGTSTQV
YATGVRSRGEWQTLTARGVSGGQGDFFAASQPLDTNVKKYSQRYSV
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgcgattaacgacgaaattctcagcttttgtcacgctgctcaccgggttaacgatcttt
gtcaccctgatcggctgctcgctgagcttttacaacgccatccagtacaagatggcccat
cgtgtccaggcggtggcgacagccattgacacgcatcttgtttcacgcgatttcaaacag
ttaacatcgcaaattgacgaactgatggtgtctgccgacgtcgtacgcgtcgatctgctg
cagggtgaaaaggtcatttatagccaaacccgtaacagtagctatcgcccggttggcacc
agtaatctctttcgcgagctctcggttccgctgatgaagcacccgggaatgacgatggat
ctggtctatcaggatccgatgggcaactattttcattcactgatgacgacggcaccgctc
acgctggccattggttttattgtactgatgctgtttctgtcggtacgttggctacagcgt
caactttccggtcaggaactgctggagatgcgttcgacgcgaattttgaatggagaacgg
ggagccagtgtacggggtacggtctatgaatggccggcgcgcaccagtagcgcgctggat
atgctgttgtccgaaatccagagcgcccaggagcagcggagccgtctcgatacgctgatt
cgctcttacgccgcgcaggacaccaaaaccggcctcagcaatcggctcttttttgacaac
caactggcgacgttgctggacgatcaggagaagatcggcgcgcatggcgtggtgatgatg
attcgcctgccggactttaacctgttgcgcgacagttgggggcgtaacctcgccgaagaa
gaactgtttagtctgatcaatttattgtccacttttatgatgcgttttccggggtcgcta
ctggcgcgctaccatcgcagcgactttgccgttttactgccgcaccgcactttgaaagag
gcggaaagcgtagccggacaacttttaaaagcagtcgatgcacttccgactaataaaatg
ctcgatcgtgacgatatggtacatatcggcatttgcgcctggcgtagcgggcagtcgacg
gaacaggtgatggaacatgcagaggcggcgacccgcaatgctgtgttgcagggcggaaat
agctggacggtgtatgacgactcgttgccggaaaaagggcgtggcaacgtgcgctggcga
acgctgattgagcagatgctcagccgcggcggcccgcgaatttatcagaaaccggccgtc
acccgggacggacatgtgcatcatcgggaactgatgtgccgcatctttgatggtaatgaa
gaggtcagcacggcggaatacatgccgatggtgttacagttcggtttatcagaagagtat
gaccgcttacaaataagccgcgtcatcccgctgctaaactactggccggaagagaatctg
gcgatgcaggtgacggtagagtcgctgattcgtccacgttttcagcgttggttacgcgat
accttgatgcagtgtgaaaaatcgcaacgaaaacgcataattattgaacttgcggaggcg
gatgtaggtcaacacatcagccggttgcagcccgttatccgcttagtgaatgcattaggc
gttcgggttgccgtcacgcaggcgggcttaacgctggtgagtaccagctggattaaggaa
ctcaatgtggaattgatcaagctccatccgagtctggtcaggaacattgagaagcgaacg
gaaaaccagttgctggttcaaagcctggtggaggcgtgctcaggcaccagcacccaggtt
tacgcaacgggtgtacgttcgcgcggtgagtggcagacgctgacagcgcgtggtgtttcc
ggtggacagggggatttttttgctgcctcccagccgctggataccaatgtgaaaaaatat
tctcaaagatactcggtttaa

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