Citrobacter sp. CFNIH10: C2U53_09030
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Entry
C2U53_09030 CDS
T05324
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cir
Citrobacter sp. CFNIH10
Pathway
cir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2U53_09030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cir03400
]
C2U53_09030
Enzymes [BR:
cir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C2U53_09030
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C2U53_09030
DNA repair and recombination proteins [BR:
cir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C2U53_09030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AUZ63976
UniProt:
A0A3Q8DMI0
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All DBs
Position
complement(1164857..1165666)
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AA seq
269 aa
AA seq
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MPELPEVETSRRGIEPHLVGATILHANVRNGRLRWPVSEEIYRLSDKPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRILPEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
EGHNVLAHLGPEPLSDTFNGEYLQQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSPAEYELLVRVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRVCGTPIVASKHAQRATFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtcgaaaccagccgccgcggtattgaaccgcatctggtcggg
gcaaccattctgcatgccaatgtgcgtaatggacgtctgcgttggccggtatcagaagag
atctaccgtctgagcgacaaaccggtgctcagcgttcagcgccgtgcgaaataccttctg
ctggagctacccgatggctggatcatcattcacctggggatgtcaggcagtctacgtatc
cttcctgaagaactgccggcagaaaaacatgaccatgtcgatttagtgatgagtaacggt
aaagtcctgcgctacaccgatccccgtcgctttggtgcctggctgtggacgaaagaactg
gaagggcacaacgtactggcgcatctcggtcctgaaccgctaagcgatactttcaacggc
gaatacctgcaacagaaatgtgcgaagaagaaaacggcgattaaaccctggttgatggat
aataagctggtcgtgggggtcggaaatatctacgccagtgaatctctgtttgctgcgggt
attcatcctgaccgtctggcgtcgtcattgtcgccggctgaatatgaactgctggtgcgc
gtgattaaggccgtcctgctgcgttcaatagaacaggggggaacgacgctgaaagatttt
ctgcaaagcgatggtaaaccgggctattttgctcaagagttgcaggtctatggccgtaaa
ggtgagccatgcagagtgtgcggaacgccgatcgtagcatcgaaacacgcgcagcgtgcg
acgttctattgccgtcagtgccagaagtaa
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