Citrobacter sp. CFNIH10: C2U53_09410
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Entry
C2U53_09410 CDS
T05324
Symbol
dagR
Name
(GenBank) transcriptional regulator DagR
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
cir
Citrobacter sp. CFNIH10
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cir03000
]
C2U53_09410 (dagR)
Transcription factors [BR:
cir03000
]
Prokaryotic type
Helix-turn-helix
Other families
C2U53_09410 (dagR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA_5
AAA_22
EIIA-man
AAA
Mg_chelatase
AAA_16
NACHT
AAA_14
AAA_2
HTH_Crp_2
AAA_25
TrmB
IstB_IS21
nSTAND3
AAA_7
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AUZ64042
UniProt:
A0A3Q8D7H7
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All DBs
Position
complement(1236845..1239643)
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AA seq
932 aa
AA seq
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MRRIEIVLGELERLTRGLDRADLAQETAFTAEAIGFNLGLARNSVSKDLNQLWNDGLAIK
SRGRPVFFLHRQTLETLLGRKLESSEREVRSVADLLPQTENTGDDDPFTGLIGYDRSLRD
AVEKGRAAVLYPQGLHVLLTGPSGVGKTFFAELMHRFACEKSAGSPPPLVYFNCAEYAHN
PELLSSHLFGHRQGAFTGANENKPGLVEQADGGYLLLDEVHRLPYEGQEKLFSILDKGEY
RPLGDSSKARSISVRLICATTEPANSSLLRTFQRRIQVSIDLPGIRQRSIEEQVELIVGF
LQRESRKIERTVSIDKTLLLWLLNKPLEGNIGQLKSDIQFLCAQAWASGMTEHNDTLQLD
KRLAEIPFHATPEQRLLVDALFEGKERLNIDARTLPALKTSLATGAEIEESDLFYSFLTR
EYVNLRNSNVPPAETLAILKNKLSSIFEYGLYSRDSVAHPPRYGDQIEERVTLLIGCVEQ
VLTFTLPENLVNPLRKHFLALIGYVQRGLIPQLYSSSLILDRCKDEYDNATLLCRKINEL
LHIQCPATEVVWLCLFLKECRHYRQRIDASPDCGVILVAHGATTATSMAQYVNRVLERDL
FSAVDMPFEQSVHDTLETLTQIIQTQRYQRLILMVDIGSLVHFGSTISKLFQIDVLLMPN
ITLTSLLEVGLDLSYETSDLPQLAALMQSKNIPCQLCTPQQENGGKVLVVSCITGMGTAE
KIKKVLEESFGELMSQDTRMVILDYNDVRSLERVQQALNANERLAGIVGTFQPGLPDIPF
ISLEELFSEQGPELVLSLLTPDLSSAERRLEMERSAMRFISALTMESIINHISVLNPQRI
LKEMEGVLNHLTTALSLKPSRQVTLRFLIHCCCMVERIVINRKPLQMALENKPNLDPRAF
SVIKSAFLPIEEAYAIRLSDAEYFYIYELLYS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagacggatcgagatcgtactgggagagcttgaaaggctgacgcgtgggctggatcgt
gccgatttggcgcaggagacggcgttcactgcggaggcgattggcttcaacctggggctg
gcgcgcaactcggtcagtaaagatctcaaccaactgtggaatgacggtctggcgattaaa
agccgggggcgtccggtgttcttcctgcaccgccagacgctggagacattgctgggtcgc
aaactggagagtagcgagcgcgaggtgcgctcggtggctgacctgcttccgcaaacggaa
aatacgggcgacgacgatcctttcaccggcctgattggctatgaccgcagcctgcgcgat
gcggttgaaaaaggccgcgccgccgtgctctatccgcaaggtttgcacgtactgctgacc
ggcccatctggcgtggggaaaaccttttttgccgaactgatgcaccgcttcgcctgcgaa
aagtccgccggttccccaccgccgctggtctactttaactgcgccgagtacgcccataac
ccggaactgctctcttcccacctgtttggccatcgtcagggggcatttaccggcgcgaac
gagaataaacccggtctggttgagcaggcagacggcggctatttgctgctcgatgaagtg
caccgtctgccctacgaaggtcaggaaaaactgttctctattcttgataagggtgagtac
cgtccgctgggggacagcagtaaggcgcgttcgatctcggtacggctgatttgcgccacc
acggaaccggcgaattcgtcgctgttgcgtaccttccagcgacgcattcaggtaagcatc
gatttgccggggattcgtcagcgatcgattgaagaacaagtggagctgattgttggtttc
ctgcagcgtgaaagtcgcaaaatcgagcgcacggtcagcatcgacaaaacgctactgctc
tggctgttgaacaaaccgctggagggcaacattggtcagttgaagagtgatatccagttc
ctgtgcgcccaggcgtgggcgtcaggaatgacggaacataatgacacactacaactggat
aaacggctggcggagataccgtttcacgccacgccggaacagcgcctgttggtcgatgcc
ttgtttgaagggaaagagcggctgaacattgatgcgcgcacgttaccggcgctgaaaacg
tcgctggcgaccggggcggaaatcgaagagagcgatctgttttacagcttcctgacccgt
gaatatgtcaatctgcgcaacagtaatgtcccgccggcggaaacactggctatcctgaaa
aacaagctcagctcgattttcgaatatggcctctacagtcgcgatagcgtggcgcatcca
ccgcgttatggcgatcaaatcgaagaacgcgtgacgctgttgatcggctgcgtggaacag
gtgcttacgtttacgctgccggaaaacctggtgaatccgctgcgcaagcacttcctggcg
ctgattggctacgtccagcgcgggttgattccccagctctactcttccagtctgatcctc
gatcgctgcaaagatgaatacgataacgccacgctgctgtgccgcaaaattaatgaactg
ctgcatattcagtgcccggcgacggaagtggtctggctgtgcctgttcctgaaagagtgt
cgtcattaccgccagcgcattgatgccagtccggattgcggggtgattctggtcgctcac
ggcgcgaccaccgcgaccagcatggcgcagtatgttaaccgtgtactggaacgcgacctg
ttcagcgcagtcgacatgccgtttgagcagtcggtacatgacacgctggaaacgctgacc
cagattattcagacccaacgctatcagcggctgatcctgatggtcgacatcggttcactg
gtacatttcggcagtacgatcagcaagttatttcagatagacgtactgctgatgcccaac
atcacgctgaccagtctgctggaggttgggctggatttaagttacgaaaccagcgattta
ccccaattggcggcgctgatgcagagcaaaaatatcccctgccagctgtgtacgccgcag
caggaaaacggcggcaaagtgctggtcgtttcctgcattaccggcatgggaacggcggaa
aaaattaaaaaagtgctcgaggagagcttcggcgaactgatgtcgcaggacacgcgaatg
gtgatcctcgattacaacgacgtgcgcagtctcgaacgtgtccagcaggcgctgaatgcc
aatgagcgactggcggggattgtcgggactttccagcccggactgccggatattccgttt
atctcgctggaagaactgttctctgagcaggggccggagctggtgttaagcctgctgacg
ccggatctctccagcgccgagcgccgtctggagatggagcgcagcgcgatgcgctttatc
agcgcgctgaccatggagagcatcatcaatcatatttcagtgctcaacccgcagcgcatt
ctgaaagagatggagggcgtgcttaaccatctgacgactgcgctttccctcaaacccagt
cgccaggtgacactacgcttcctgatccactgctgttgcatggttgagcgtatcgtgatc
aaccgtaaaccgttacagatggcgctggaaaacaaaccgaatctggatccccgcgcgttt
agtgtcattaaatctgcgtttctgccgatcgaagaggcctatgccatccggttatcggat
gcggaatatttttatatctacgaactgctttatagctga
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