Citrobacter sp. CFNIH10: C2U53_10410
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Entry
C2U53_10410 CDS
T05324
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cir
Citrobacter sp. CFNIH10
Pathway
cir00071
Fatty acid degradation
cir00280
Valine, leucine and isoleucine degradation
cir00310
Lysine degradation
cir00362
Benzoate degradation
cir00380
Tryptophan metabolism
cir00410
beta-Alanine metabolism
cir00640
Propanoate metabolism
cir00650
Butanoate metabolism
cir00907
Pinene, camphor and geraniol degradation
cir00930
Caprolactam degradation
cir01100
Metabolic pathways
cir01110
Biosynthesis of secondary metabolites
cir01120
Microbial metabolism in diverse environments
cir01200
Carbon metabolism
cir01212
Fatty acid metabolism
Module
cir_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
C2U53_10410 (fadB)
00650 Butanoate metabolism
C2U53_10410 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
C2U53_10410 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C2U53_10410 (fadB)
00310 Lysine degradation
C2U53_10410 (fadB)
00380 Tryptophan metabolism
C2U53_10410 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
C2U53_10410 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
C2U53_10410 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C2U53_10410 (fadB)
00930 Caprolactam degradation
C2U53_10410 (fadB)
Enzymes [BR:
cir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
C2U53_10410 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
C2U53_10410 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
C2U53_10410 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
C2U53_10410 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AUZ64216
UniProt:
A0A3Q8DFS3
LinkDB
All DBs
Position
complement(1445941..1448130)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDNLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGQALDVLEKQTDLKGLLLRSN
KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLSAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGAEQALK
IGLVDGVVKAEKLIEGAKAVLRQAISGDLDWKAKRQPKLEPLKLSKIEAAMSFTIAKGMV
AQTAGKHYPAPMTAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVK
GKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLTLGMTEAAKLL
NKQLERGKIDGLKMAGVISTIHPTLDYAGFDRVDVVVEAVVENPKVKKAVLSETEDKVRP
DTVLASNTSTIPISELASVLKRPENFCGMHFFNPVHRMPLVEIIRGEKSADETIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMSAGFPQRMQKDYRDAIDALFDASRFGQKNGLGFWRYKEDNKGKP
KKEEDATVDDLLADVSNAKRDFSEDEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYDVPEGLRNKARHNEPYYPPVEPA
RPVGDLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaaaggcgacaacctgtacctcgactggctggaagatggcatcgccgaactg
gtgttcgatgccccaggctcagtgaacaaactcgacacggcaaccgtcgccagcctcggc
caggcgctggacgtactggaaaaacaaacagatttaaaagggctgctgctgcgttcgaat
aaagcagcctttatcgtcggtgccgatatcaccgaattcctttcgctgtttctcgttccc
gaagaacagctcagccagtggttgcatttcgccaacagcgtctttaaccgtctggaagat
ctgccggtccccacgctctctgcggttaacggctatgcgttaggtggcggctgcgaatgc
gtactggcgaccgattaccgcctggcgacgccggatctgcgtatcggtctaccagaaaca
aagctgggcatcatgccaggctttggcggttccgtacgtatgccgcgcatgttaggcgcg
gacagcgcactggagatcattgctgccggtaaagacgttggtgctgaacaggcgctgaaa
atcggtctggtcgatggcgtcgtgaaagcggaaaaactgattgaaggcgcaaaagcagtt
ttacgtcaggccatcagcggcgatctggactggaaagcgaagcgtcagccgaagctggaa
ccgctgaagctcagcaaaattgaagctgccatgagctttaccattgccaaaggcatggtc
gcgcaaacggcaggcaaacattacccggccccgatgactgcagtgaaaaccattgaagcc
gccgcgcgttttggccgtgaagaagcgcttaatctggaaaacaaaagttttgttccgctg
gcgcacaccaatgaagcccgcgcgttggtcggtatcttccttaacgaccaatatgtgaaa
ggcaaagcgaagaagctgaccaaagacgttgagacgccaaaacaggctgctgtgctgggc
gcaggcattatgggcggcggtatcgcgtatcagtcggcgtggaaaggcgtgccggttatc
atgaaagatatcaacgacaaatccctgaccctcggaatgaccgaagcggctaagctgctg
aacaaacagcttgagcgcggcaaaattgacggtctgaagatggcgggcgtgatttcgacc
attcaccctacgctggactatgccggttttgatcgcgtggacgtcgtggtcgaagccgtg
gttgaaaacccgaaagtcaaaaaagcggtgctgtccgaaacggaagacaaggttcgcccg
gataccgtgctggcctctaacacctccaccattcccatcagtgaactggcaagcgtgctg
aaacgcccggaaaatttctgcgggatgcatttctttaacccggttcaccggatgccgctg
gttgagatcattcgtggcgagaaaagcgccgatgaaaccatcgcgaaagtagtcgcctgg
gcaagcaaaatgggcaaaacaccgattgtggtgaacgactgccctggcttctttgtaaac
cgcgtactgttcccttacttcgcgggattcagccagttgctgcgcgacggagcggacttc
cgcaaagttgacaaggtcatggaaaaacagttcggctggccgatgggcccggcatacctg
cttgatgttgtcggcattgatacagcgcatcacgcgcaggccgtgatgtccgcaggcttc
ccgcagcggatgcaaaaagattatcgcgacgcgatcgatgcgctgtttgacgccagtcgt
tttggtcagaaaaacggtctgggcttctggcgctataaagaagacaacaaaggtaagccg
aagaaagaagaggatgccaccgttgatgacctgctggctgacgtcagtaacgcgaagcgt
gatttcagcgaagacgaaattatcgcccgtatgatgatcccgatggtcaacgaagtggtg
cgctgtctcgaagaaggcattatcgccagtccggcagaggccgatatggcactggtttac
ggtctgggcttccctccgttccacggcggcgcgttccgctggctggatacgctcggcagc
gcgaagtatctcgatatggcgcaacagtatcagcacctcggtccgttatacgacgttccg
gaaggtctgcgtaataaagcgcgtcataacgaaccgtattatcccccggttgagcctgcc
cgtccggtcggcgacctgaaaacggcttaa
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