Citrobacter sp. CFNIH10: C2U53_10975
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Entry
C2U53_10975 CDS
T05324
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cir
Citrobacter sp. CFNIH10
Pathway
cir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2U53_10975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cir03400
]
C2U53_10975
Enzymes [BR:
cir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2U53_10975
DNA repair and recombination proteins [BR:
cir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2U53_10975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA-like_WH
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
TrwB_AAD_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUZ64319
UniProt:
A0A3Q8D6E3
LinkDB
All DBs
Position
complement(1563775..1565976)
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AA seq
733 aa
AA seq
DB search
MPVARVALPVPLPRTFDYLLPEGMSSVKAGCRVRVPFGKQQERVGIVVSVSDKSELPLNE
LKAIVDVLDDEPLFSTSVWRLLIWAADYYHHPIGDVLFHALPILLRQGKPATNAPMWYWF
ATEEGQVVDLNSLKRSPKQQQALAALRQGKIWRDQVTALEFNDAALQALRKKGLCELASE
TPGFSDWRTNYAVCGERLRLNTEQATAVGAIHSASDSFSAWLLAGVTGSGKTEVYLSVLE
NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSALNDSERLSAWLKAKNGEAAI
VIGTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVWRAHSERIPIILGSATP
ALETLCNVRQKKYRMLRLTRRAGNARPAIQHVLDLKGQQVQAGLAPALIARMRQHLQADN
QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC
GSTHMVPVGLGTEQLEQALAPFFPGVPISRIDRDTTSRKGSLEQHLAEVHRGGARILIGT
QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTH
HPEHPLLQTLLHKGYDAFAEQALAERQTMQLPPWTSHVIVRAEDHNNQQASLFLQQLRNL
IQASPLADDKLWVLGPVPALAPKRGGRYRWQILLQHPSRIRLQHIVSGTLALINTLPDSR
KVKWVLDVDPIEG
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtagcgcgcgttgccttacccgttccgcttccccgcacctttgactatcttctg
ccggaaggcatgagcagcgtcaaggcaggatgtcgcgtgcgcgtgccgtttggcaaacag
caagagcgcgtcgggatcgtggtttcggtcagcgacaaaagcgagctgccgctgaatgaa
ctgaaagcgatcgttgacgtgctggatgatgaaccgctcttttcgacctctgtctggcgt
ctgctgatctgggcggcggattattatcatcatcccatcggcgatgtgctgttccacgct
ctgcctattctgttgcgtcaggggaaaccagctaccaacgcgcctatgtggtactggttt
gccaccgaagagggccaggtggttgatctcaatagcctgaagcgttcccccaaacagcag
caggcactggctgcgttacggcaggggaaaatctggcgcgatcaggtgactgctctcgaa
ttcaacgatgccgcgcttcaggcgctgcgtaaaaaaggcttgtgcgaactggcgagcgaa
acgcctggttttagcgactggcgcacaaattacgcggtctgcggcgaacgtctgcgcctg
aacaccgaacaggccaccgccgttggcgccattcacagtgcgtcagacagtttctccgcc
tggctgctggccggggtgacaggctcaggtaaaaccgaagtttacctgagcgtactggaa
aacgtcctcgcgcagggtaaacaggcgctggtaatggtgccggaaattggcctgacgccg
caaaccatcgcccgctttcgcgaacgtttcaacgcgccggtggaagtgctgcactccgct
ctcaacgacagcgaacgcctctctgcctggctgaaggcgaaaaacggcgaagccgcgatc
gtcattggcacccgttcctccttatttacaccgtttaaaaatcttggcgtgatcgtgatc
gatgaagaacacgacagttcctataaacagcaggaaggctggcgctaccatgcccgcgat
ctggcggtctggcgcgcccatagtgaacgcatcccgattatcctcggttcggcaacgccg
gcgcttgagacgctttgcaatgtcaggcagaaaaaataccgcatgctgcgcctgacgcgt
cgtgccggaaacgcacgccccgccattcagcatgtactcgatttaaaaggtcaacaggta
caggcaggcctggcaccggcgttaatcgcccgtatgcgccagcatttacaggccgataac
caggtaattttattcctcaaccgccggggttttgcgcctgcgttgctttgccacgactgc
ggctggattgcagagtgtccgcgttgcgatcactactacaccctgcaccaggcgcagcac
cacttgcgctgccaccactgcgacagtcagcgcccggtgccgcgtcagtgcccctcctgc
ggctccacgcatatggtgccggtcgggttaggcaccgagcagcttgaacaagccttagcc
cccttctttcccggcgtgccgatttcccgcattgaccgcgacaccaccagccgaaaagga
tcgcttgagcaacatctggcggaagtccatcgcggcggcgcaaggatcctgatcggcacc
cagatgctggcaaaaggtcaccacttccctgatgtgacgctggttgcgctgctggatgtg
gatggcgcgttgttctccgcagacttccgctcggcggagcgctttgcccaactttatact
caggtgtccggacgcgcaggacgcgcaggcaaacagggggaagtggttttgcagactcac
catccggaacatccgctgctgcaaaccttgttgcataaaggctatgacgcgtttgccgaa
caggcgctggccgaacgccaaacgatgcaactgccgccgtggaccagccacgtcatcgtg
cgtgctgaagatcataataatcagcaggcttcactgtttttgcagcagttgcgtaatctg
atccaggccagcccgctggcagatgacaagctctgggtgttaggccccgttccggcgctg
gcgccgaagcgcggcggacgctatcgctggcagattttattgcaacatccatcacgaatt
cgtttgcaacatatcgtcagcggaacgctcgcgctcatcaataccttaccggattcacgc
aaggtgaaatgggtactggatgtcgatcctattgagggataa
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