Citrobacter sp. CFNIH10: C2U53_11850
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Entry
C2U53_11850 CDS
T05324
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cir
Citrobacter sp. CFNIH10
Pathway
cir03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C2U53_11850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cir03400
]
C2U53_11850
DNA repair and recombination proteins [BR:
cir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2U53_11850
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C2U53_11850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_25
AAA_23
NACHT
Viral_helicase1
T2SSE
cobW
ExoX-like_C
ScfRs
Motif
Other DBs
NCBI-ProteinID:
AUZ64470
LinkDB
All DBs
Position
complement(1752142..1754964)
Genome browser
AA seq
940 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPVIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRDDLSTRLAESFETALELSGGTAVVADMDDE
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVEAPWASLSANVHKVVLYGSGKESIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLKREARH
VFVENTPLPTISDMSIGHAMDFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLRTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDVQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPIRELFAGVPE
SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaacatcaacctcgtc
atcccccgcgacaaactgattgtcgtgaccgggctttcggggtcaggcaaatcctcgctc
gctttcgacaccttgtatgccgaagggcagcgtcgttacgttgaatccctttctgcctat
gcgcgtcagtttctgtcgttaatggaaaagccggatgtcgatcatattgaggggctgtct
cccgccatctcaattgaacagaaatcgacgtcccataacccgcgctcgacggtcggcacc
attaccgaaatccacgactacctgcgtctgctgtttgcccgcgttggcgaaccgcgctgc
ccggatcacgatgttccgctggcggcgcagaccgtaagccagatggtggataacgtcctg
tcgcagccggagggcaaacgcctgatgctgctggccccggtgattaaagagcgtaagggc
gagcacaccaaaacgctggaaaacctggcaagccagggttatatccgcgcccgtatcgat
ggcgaagtgtgtgacctctccgatccgccaaagctggaactgcagaagaaacacactatc
gaggtggtgatcgatcgtttcaaagtgcgtgacgatctcagcactcgtctggcggaatcg
tttgagaccgcgctggagctgtccggtgggacggcggtggttgccgatatggacgacgaa
aaagcagaagaactgctcttttccgccaacttcgcctgcccaatctgcggttacagcatg
cgcgaactggaaccgcgcctgttctcctttaacaacccggcgggcgcctgcccgacctgc
gatgggctcggcgtacagcaatatttcgaccccgatcgcgtgatccagaaccctgagctg
tcgctagcgggcggggccattcgcggttgggatcgccggaacttctattacttccagatg
ctgaaatcgctggcagaacactacaagtttgacgttgaagccccgtgggccagcctgagc
gcaaacgtacacaaagtggtgctgtacggttctggtaaagagagtattgaattcaaatac
atgaacgatcgtggcgatacctccgtgcgtcgccatccgtttgaaggcgtactgcacaac
atggaacgccgctataaagagacggaatccagcgccgttcgtgaagagttagccaagttc
atcagcaaccgcccgtgcgccagttgtgaaggaacccgtcttaagcgcgaagcgcgccac
gtcttcgttgaaaatacaccgctgccgaccatttccgacatgagcatcggacatgcgatg
gacttcttcaacaatctcaaactcgccggtcagcgggcgaagattgcagagaaaatcctc
aaagagattggcgaccgcctcaagttcctggtcaacgttggcctcaactatctgacgctg
tcccgttctgcggaaacgctctccggcggcgaagcccagcgtattcgactggcaagccag
attggcgccggtctggtcggcgtgatgtacgtgctggatgagccgtccatcggccttcac
cagcgcgataacgaacgtctgctgaggacgctgatccacctgcgcaatctcggcaatacc
gtgattgtggtagagcacgatgaagatgcgattcgcgccgccgaccacgtgattgatatc
ggtccgggtgccggcgtccacggcggcgaagtggttgccgaaggtccgctggaagcgatt
atggcggtgccggagtccctgaccggccagtacatgagcggcaaacgcaagattgaagtg
ccgaaacagcgcgttcccgcaaacccggagaaagtgctgaaactgaccggcgcgcgcggc
aacaacctgaaagacgtgacgttaacgctgccggtcggcctgttcacctgcatcaccggc
gtgtccggttccggtaagtcgaccctgattaacgatacgctgttcccgattgcacagcgc
cagttgaacggtgcgacgatcgccgaaccggcgccgtaccgcgatgtgcaggggctggag
catttcgataaggtcatcgacatcgatcagagcccgattggacgtacaccgcgttccaac
ccggcaacgtacacgggcgtgtttacgccaatacgtgagctgtttgctggcgtaccggaa
tcacgctcacgcggctatacgccggggcgtttcagttttaacgttcgcggcgggcgttgc
gaagcctgtcagggcgatggcgtaattaaagtcgaaatgcacttcctgccagatatttac
gtgccgtgcgaccagtgcaaaggcaagcgctataaccgcgaaacgctggagattaagtac
aagggcaaaaccatccacgaagtgctggatatgactatcgaagaagcacgtgaattcttt
gatgccgtcccggcgctggcacgtaagctgcaaaccctgatggatgtcggtttgacctac
attcgtctcggccagtcggcgacaacgctctccggtggtgaagctcagcgtgtgaagctg
gcgcgcgaactgtcgaaacgcggcaccggccagacgctctatattctggatgaaccgact
acgggtctgcattttgccgatatccaacaattgctggacgtgctccatcagttacgcgat
cagggcaataccatcgtagtgattgagcacaacctggacgtcatcaaaacggcggactgg
atcgtggatctcggtccagaaggcggtagcggcggtggggaaatcctcgtctccggtacg
ccggaaaccgtggcggaatgtgaagcctcacacacggcccgcttcctgaaaccgatgctg
taa
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