Citrobacter sp. CFNIH10: C2U53_12510
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Entry
C2U53_12510 CDS
T05324
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cir
Citrobacter sp. CFNIH10
Pathway
cir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2U53_12510 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cir03019
]
C2U53_12510 (groL)
03110 Chaperones and folding catalysts [BR:
cir03110
]
C2U53_12510 (groL)
03029 Mitochondrial biogenesis [BR:
cir03029
]
C2U53_12510 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cir04147
]
C2U53_12510 (groL)
Enzymes [BR:
cir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
C2U53_12510 (groL)
Messenger RNA biogenesis [BR:
cir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C2U53_12510 (groL)
Chaperones and folding catalysts [BR:
cir03110
]
Heat shock proteins
HSP60 / Chaperonin
C2U53_12510 (groL)
Mitochondrial biogenesis [BR:
cir03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
C2U53_12510 (groL)
Exosome [BR:
cir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C2U53_12510 (groL)
Exosomal proteins of other body fluids (saliva and urine)
C2U53_12510 (groL)
Exosomal proteins of breast cancer cells
C2U53_12510 (groL)
Exosomal proteins of colorectal cancer cells
C2U53_12510 (groL)
Exosomal proteins of bladder cancer cells
C2U53_12510 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AUZ64589
LinkDB
All DBs
Position
1882619..1884265
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGDEAAIQGRVTQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKIAGLKGQNEDQNVGIKVALRAMESPLRQIVLNCGEEPSVVANTVKAGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagacgcagtgaaagtcaccctcggtccgaaaggccgtaacgtcgttctg
gacaaatccttcggcgcaccgaccatcactaaagatggtgtttccgtagcacgtgaaatc
gaactggaagacaagttcgaaaacatgggcgcgcagatggtgaaagaagtcgcctctaaa
gcgaatgacgcagcaggcgacggtaccaccactgcgaccgtactggctcagtccatcatc
accgaaggtctgaaagccgttgctgcgggtatgaacccgatggacctgaagcgtggtatc
gacaaagcggttgcggctgcggttgaagaactgaaagcgctgtccgtaccgtgctccgac
tctaaagccattgctcaggtgggtaccatctctgctaactccgacgaaaccgtaggtaaa
ctgatcgcagaagcgatggacaaagtcggtaaagaaggcgtgattaccgtggaagacggt
accggtctgcaggacgaactggacgtcgttgaaggtatgcagttcgaccgtggctacctg
tcaccgtacttcatcaacaagccggaaactggtgcagtagaactggaaagcccgttcatc
ctgctggctgacaagaaaatctccaacatccgcgaaatgctgccggttctggaagccgtt
gcgaaagcaggcaaaccgctgctgatcatcgctgaagatgtggaaggcgaagcgctggca
acgctggtggttaacaccatgcgcggcatcgtgaaagtggctgcggttaaagctcctggt
ttcggcgatcgtcgtaaagcgatgctgcaggatatcgcgactctgactggcggtaccgtg
atctctgaagagatcggtatggagctggaaaaagcaacgctggaagacctgggtcaggca
aaacgcgttgtgatcaacaaagacaccaccaccatcatcgatggcgtgggtgacgaagcg
gcaatccagggtcgtgtgactcagattcgtcagcagatcgaagaagccacctccgactac
gaccgcgaaaaactgcaggagcgcgtagcgaaactggcaggcggcgtggcagtcatcaaa
gttggtgctgcgactgaagttgaaatgaaagagaaaaaagcccgcgttgaagatgccctg
cacgcgacccgtgctgcggtagaagaaggcgtggttgccggtggtggcgtggcgctgatt
cgcgtagcctccaaaatcgctggcctgaaaggtcagaacgaagatcagaacgtcggtatc
aaagttgcgctgcgcgcaatggaatctccgctgcgtcagatcgttctgaactgcggcgaa
gaaccgtctgttgtcgctaacaccgtgaaagcgggcgatggcaactacggttacaacgca
gcgaccgaagaatacggcaacatgatcgatatgggtatcctggatccaaccaaagtcacc
cgttctgctctgcagtacgcggcttctgtggctggcctgatgatcaccaccgagtgcatg
gtaaccgacctgccgaaaggcgacgcgcctgacttaggtgctgctggtggtatgggcggc
atgggtggtatgggcggcatgatgtaa
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