Citrobacter sp. CFNIH10: C2U53_13425
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Entry
C2U53_13425 CDS
T05324
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
cir
Citrobacter sp. CFNIH10
Pathway
cir02010
ABC transporters
cir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C2U53_13425
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C2U53_13425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cir02000
]
C2U53_13425
Transporters [BR:
cir02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
C2U53_13425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
RsgA_GTPase
AAA_30
AAA_29
KdpD
MukB
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AUZ64757
UniProt:
A0A3S7D728
LinkDB
All DBs
Position
complement(2062871..2064424)
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AA seq
517 aa
AA seq
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MQMSQEKIAPLLSAQSVCKQYSGVNVLKGIDFVLRKGEVHALLGGNGAGKSTLMKIIAGI
TPADSGIIEIEGARCTKLTPILAHQLGIYLVPQEPLLFPSLTVKENILFGLPKHQSSAQK
MAAMLTALGCQFDINSPAGSLDVADRQMVEIMRGLMRDSRILILDEPTASLTPAETDRLF
SRLRELLSTGVGIVFISHKLPEIRQIADYISVMRDGIIALSGKTADLTTDEIIQAITPAS
RTNALSATQKLWLELPGNRPQHEAGTPVLSLENVTGEGFMNVSFEVRAGEILGLAGLVGA
GRTELAETLYGLRPLRAGSIVLGGKDISSLSTRERLQHGLVYLPEDRQSSGLNLDASLAW
NVCALTHNHSGFWANPAKDSATLERYRRALNIKLNDPEQPARTLSGGNQQKILIAKCLEA
SPQVLIVDEPTRGVDVSARNDIYQLLRSIAAQNVAVLFISSDLEEIEQMADRVYVMHQGE
TGNDALQGDEINVDTIMHVAFGDRTSGATPHSGEAPC
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgagtcaagaaaagatcgccccactactcagcgcgcagtctgtctgcaagcag
tattccggcgtcaacgtcctgaaagggattgattttgtcttacgcaaaggcgaagtccat
gcgctcctgggcgggaatggcgccgggaaatccacgctgatgaaaatcatcgccggcatt
acccctgcggatagcggaatcattgagattgagggagcccgctgtacaaaactgacgccc
attctggcgcatcagttaggcatctaccttgtcccgcaagagcctctgctcttccccagc
ctgacggtaaaggagaatattctctttggtctgcccaaacaccagagctcggcgcaaaaa
atggcggcgatgctgaccgcgctgggctgccagtttgatatcaacagcccggcgggttca
ctggatgtggccgaccggcaaatggtcgaaatcatgcgcgggctgatgcgcgattcacga
attttgatcctcgatgaacccaccgcctcactgacgcctgcggaaaccgatcgtttattc
agccgcctgcgtgaattgctgagcactggcgtagggatcgtctttatctcccacaagctg
ccagagatacgccagatagcggattacattagcgtgatgcgggacggcatcattgcgcta
tccggaaaaacggcggatctgaccacggacgagattatccaggccatcacgcctgcctca
cgcaccaacgcgctgagcgcgacgcaaaaactgtggctggaattgcccggcaaccgtccg
cagcacgaggcgggcacgccggtgttgagtcttgagaatgtgaccggcgaagggtttatg
aacgtcagtttcgaggtccgcgccggggaaattttagggctggccggtctggtcggcgcc
ggacgtacagaacttgccgaaacgctttacgggctacgaccgctacgggccggaagcatc
gtactcggcggcaaggatatctcctcactttccacccgcgaacgtctacagcacggtctg
gtgtatttgccggaggaccggcaatcgtcagggctgaatctggatgcctcgctggcgtgg
aatgtttgcgcattaacccacaaccacagcggtttctgggctaatccggccaaagacagc
gccacgctcgaacgctatcgccgcgcgcttaatatcaagctcaacgatcctgaacagcct
gcccgcacgctctctggcggtaatcagcaaaaaatcctgatcgccaaatgccttgaagcc
tcgccgcaggtgctgattgtggatgagccgacgcgcggtgtggacgtctcggcgcgtaat
gacatctatcagttgctccgcagtattgccgcccagaacgtcgcggtgctgttcatctct
tctgatctggaggagatagaacagatggccgatcgcgtttacgtcatgcaccagggagaa
acgggcaacgatgctctgcaaggcgacgagattaatgtcgacaccatcatgcacgtggca
ttcggcgaccgcacgtcaggggctacaccacattccggggaggcgccatgctga
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