Citrobacter sp. CFNIH10: C2U53_18910
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Entry
C2U53_18910 CDS
T05324
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
cir
Citrobacter sp. CFNIH10
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cir03009
]
C2U53_18910
Ribosome biogenesis [BR:
cir03009
]
Prokaryotic type
ribosomal protein modification factors
C2U53_18910
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AUZ67796
UniProt:
A0A3Q8DEA9
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Position
complement(3183076..3184836)
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AA seq
586 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVLDG
LLDARLRAFYDPENELTGSMLIDLQSGNEERGICGLPFTRQSDNQTVYIPMNIIGNLYVS
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVESIATLEAE
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWSFSGTTEEEFATLM
AIFNAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNAMGVHLRETLLSLPNS
RWDKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQ
ALIWTEWTMEFNTSIFSAERANYYRCLQTLLLLSQEEEREPLQYLNAFVRMYGANAVEAA
SAALSGEAAFYGLQPVDSDLHAFASHQSLLKAYEKLQRAKSSFWSK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacatttattcccggcaaagacgccgcactggaagactccatcgctcgcttc
cagcaaaaactgctcgacctcggtttccatattgaagaggcctcgtggctgaacccggtg
ccaaacgtctggtccgtacacattcgcgataaagagtgtgcgctgtgctttaccaacggc
aaaggggcgacgaaaaaggccgcgctggcctcggcgttgggcgaatattttgagcgtctg
tcaaccaactatttctttgccgatttctggctgggtgaaaccatcgccaatggcccgttc
gtgcattatccgaacgagaaatggttcccgctgaccgaaaatgatgacgtgctggacggt
ctgctggatgcccgcctgcgcgccttctacgatcccgagaatgaactgaccggcagcatg
ctgatcgacctgcagtctggcaacgaagagcgtggtatctgcggcctgccatttacccgc
cagtcggataaccagaccgtctatattccaatgaacattatcggcaacctgtacgtctca
aacgggatgtccgccggtaacacccgtaacgaagcgcgcgtgcaagggttatctgaagtc
tttgagcgttacgtgaagaatcgcattattgccgaaagcatcagcctgccggaaattcca
gccgacgtgctggcacgctacccggcggttgtggaatctattgcaacgctggaagcggaa
ggtttccccatctttgcttacgacggctctctgggcggtcagtatccggtgatctgcgtt
gtgctgttcaatccggctaacggcacctgcttcgcctctttcggcgcacaccctgatttt
ggcgtcgcactggaacgtaccgtgacggaactactgcagggccgtggtctgaaagatctc
gacgtcttcacaccgccgaccttcgacgatgaagaagtggctgagcataccaacctggaa
acacacttcattgactccagcggtctgatctcctgggatctgttcaagcaggatgccgac
tacccgttcgttgactggagtttctccggcaccacagaagaagagtttgccaccctgatg
gcgatcttcaacgcggaagataaagaggtgtacatcgccgattacgaacatctcggtgtc
tacgcctgtcggatcatcgttccggggatgtctgatatttatcctgctgaagatctgtgg
ttagccaataacgccatgggcgtccatctgcgcgagaccctgctctcactgccgaatagt
cgctgggataaagaagactatctcaacctgattgagcaactcgatgaagaagggtttgat
gatttcacccgcgttcgtgaactgttaggcctggctaccggttcagataacggctggtac
accctgcgtattggggaactgaaagcgatgctggcgctggcaggtggtgatctggaacag
gcactgatctggaccgaatggacgatggaatttaatacgtcgatctttagcgccgagcgg
gcgaattattaccgttgcctgcaaacgctgttactgctgtcacaggaagaagaacgtgaa
ccgctgcaatatctgaacgcgtttgtccgtatgtatggcgcaaatgctgtcgaagccgcc
agtgcagcattgagcggtgaagccgccttttatggtctgcagccggttgacagcgatctg
cacgcattcgcatcacaccagtcactgttgaaggcctatgagaagttgcagcgtgcaaaa
tcttcattttggtcaaaataa
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