Citrobacter sp. CFNIH10: C2U53_22760
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Entry
C2U53_22760 CDS
T05324
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
cir
Citrobacter sp. CFNIH10
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cir03009
]
C2U53_22760
Enzymes [BR:
cir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C2U53_22760
Ribosome biogenesis [BR:
cir03009
]
Prokaryotic type
rRNA helicases
C2U53_22760
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Helicase_C_2
adh_short
CMS1
Motif
Other DBs
NCBI-ProteinID:
AUZ66432
UniProt:
A0A3S7DBQ6
LinkDB
All DBs
Position
complement(3930408..3931781)
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AA seq
457 aa
AA seq
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MTAFATLNVLPAAQLENLNELGYLSMTPVQAAALPAILAGQDVRVQAKTGSGKTAAFGLG
LLQHIDATLFQTQSLVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQ
HAPHIIVATPGRLLDHLQKGTVSLDALTTLVMDEADRMLDMGFSDAIDEVIRFAPASRQT
LLFSATWPEAIAAISGRVQRNPLAIEIDTVDALPAVEQQFYEISAHGKIPLLQTLLSQHQ
PASCVVFCNTKKDCQAVCDALNEAGQSALALHGDLEQRDRDQTLVRFANGSARVLVATDV
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANILSEML
QIRLNWVPAPTQRSVTPLVAEMMTLCIDGGKKAKMRPGDVLGALTGDMGLDGADIGKITV
HPAHVYVAVRQSVAHKAWKQLQNGKIKGKTCRVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcttttgctaccctgaatgtattacccgccgcccagctcgagaatctgaacgag
ttggggtatctgtccatgacccctgtccaggcggcggcgctgccagcgatccttgccggg
caggatgtgcgggtgcaggcaaaaaccggcagcggtaaaacggcagcatttggtctcggt
ttgttacagcatattgatgccactctgtttcagacgcagtcgctggttctgtgcccgacg
cgcgaactggcggatcaggtggccggtgaactacgtcgtctggcgcgtttcttaccgaat
accaaaatcctgacgctttgcggtggtcaacccttcggagcacagcgcgattctcttcag
cacgcgccgcatattatcgtcgccacgcctggtcgtttgctcgaccatttgcaaaagggc
accgtttcgctggacgcgttgaccacgctggtgatggatgaagcagaccggatgctggat
atgggattcagtgacgcaatcgacgaggtgatccgtttcgcgcccgcgtcgcgtcagacg
ctattgttttcggccacctggccggaagcgattgccgcaatcagcggtcgcgtgcagcga
aatccgctcgctatcgaaattgacacggtggatgcgctccccgccgtcgaacagcaattc
tatgaaatctctgcacacggtaagataccgctgttgcaaacgttgctcagtcagcatcag
ccggcttcctgcgtggtgttctgtaatactaaaaaggattgtcaggcggtgtgcgatgcg
ctcaatgaggccgggcaaagcgcgctggcgcttcatggcgatctggaacagcgagaccgc
gatcagacgctggtgcgttttgccaacggcagcgcgcgggtgctggtggcgacggatgtt
gcggcccgcgggcttgatatcaaatcgctggagctggtggtgaatttcgaactggcgtgg
gatccggaggtgcacgtccaccggattggccgtaccgcgcgcgccgggaacagcggtctg
gctatcagtttttgtgctccggaagaggcgcagcgggcgaatattctctctgaaatgctg
cagatccgccttaactgggtccctgcgccaacgcaacgcagcgttacgccgctggtcgct
gaaatgatgacattgtgtatcgacggtggcaagaaagccaaaatgcgtccaggcgatgtg
ctgggggcgttaaccggagatatggggctggatggcgcggacattggcaaaattaccgtg
catccggcgcatgtctatgtggcggtccgtcagtcggtcgcgcataaggcatggaaacaa
ctgcagaatgggaagattaaaggtaaaacctgtcgggtgcgtttactgaaataa
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