Citrobacter sp. CFNIH10: C2U53_24075
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Entry
C2U53_24075 CDS
T05324
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cir
Citrobacter sp. CFNIH10
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cir03016
]
C2U53_24075
Enzymes [BR:
cir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C2U53_24075
Transfer RNA biogenesis [BR:
cir03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2U53_24075
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AUZ66662
UniProt:
A0A3S7DCF0
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Position
complement(4176251..4177378)
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AA seq
375 aa
AA seq
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MNYQMITTDDALATLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHVALIDPHGI
SDWSPLKAILRDTAITKFLHAGSEDLEVFLNAFGELPQPLIDTQILAAFCGRPLSWGFAS
MVEEFTGVALDKSESRTDWLARPLTERQCEYAAADVWYLLPIAGKLMAETEAAGWLPAAL
DECRLMQTRRQEILAPEDAWREITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVR
EEHLWSVARYMPGSMGELDSLGLSGSEIRFHGKTLLSLVAKAQALPEEALPEPLLNLMDM
PGYRKAFKAIKALVTEVSTEHHVSAELLASRRQINQLLNWHWKLKPQTTEPELISGWRAA
LMATKLNTLLQEYQQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattaccaaatgatcaccactgacgacgcgctggcgaccctgtgcgaagcggtccgt
gcgtttcctgcgattgccctggataccgaatttgttcgtacccgcacctattatccgcaa
ctgggcctgattcagctgtttgacggcgaacatgtcgcgctgattgatccgcatggcatt
agcgactggtcgccgctgaaagcgattctgcgcgataccgccatcaccaagtttttgcac
gcgggcagtgaagatctggaagtctttctgaatgcgtttggcgaactgccgcagccgctg
atcgatacccaaatcctggcggcattttgtggtcgtcccctgtcgtggggttttgcatca
atggtggaagagttcaccggcgtggcgctggataagagcgagtcacgtaccgactggctg
gcgcgtccactgactgagcgccagtgcgaatacgcggcagccgacgtctggtatctgtta
ccgattgccgggaaactgatggcggaaaccgaggcggcgggctggttgcctgcggcgctg
gatgagtgtcgtctgatgcaaacccgtcgtcaggagatcctggcaccggaagatgcctgg
cgcgagatcaccaacgcctggcagctacgcacgcgtcaactggcctgcctgcaactgctt
gccgactggcgtctgcgtaaagcgcgtgagcgcgatctggctgttaacttcgtggttcgc
gaagagcacctgtggtccgtggcgcgctatatgcccggcagcatgggcgaactcgacagc
ctggggctttctggcagtgaaattcgcttccacggcaaaacgctgctctcgctggttgcc
aaagcgcaggcgttgccggaagaggcgctgccggaaccgctgctgaatctgatggatatg
ccgggttatcgcaaagcgtttaaggcgatcaaggcgctggtgacggaagtgagtacggaa
catcacgtcagcgcagagctgctggcgtcacgtcgtcagatcaaccaactgctcaactgg
cactggaagttaaagccgcagacaacggaacctgaactcatttccggctggcgtgcggcg
ttaatggcgacgaagctcaatacgctactgcaggaataccagcaataa
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