Citrobacter sp. CFNIH10: C2U53_28340
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Entry
C2U53_28340 CDS
T05324
Name
(GenBank) type IV secretion protein Rhs
Organism
cir
Citrobacter sp. CFNIH10
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
TQ
Motif
Other DBs
NCBI-ProteinID:
AUZ67418
UniProt:
A0A3S5G527
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Position
4949133..4953305
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AA seq
1390 aa
AA seq
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MSGKPAARQGDGTMKGGPIIQGSAGVMIGAPTGVACSVCPGGMTSGNPVNPLLGAKVLPG
ETDFALPGPLPFVLSRTYNSYRTKTPAPVGIFGPGWKAPFDIRLQIHDNELIINDNGGRS
IHFEPLFPGETAFSRSESLWLARGGVPALHESNVLHVLWQALPEDIRTSPHVYLATNSVQ
GPWWILGWSARVPGAEEPLPAPLPPYRTLTALVDNLGRRMVFHRAATGDAAGEISAVTDG
AGRRFRLVLTTQAQRAAQYRKQVTASGTKPLPFPDALPATAYGTDNGLRLAEVWLIHDPE
YPDTLPAAPLARYDYSPRGELATVYDRSGTAVRHFTYDPPHPGRMVAHRYAGRPEIRYRY
DIAGRVTEQRNPEGLSYTYSYEQNRVIITDSLNRREVLHTEGEGGLKRVVRQERSDGSAI
HSEYDPAGRLIAQTDAAGRKTEYRLSPGSGQLKEIIAPDGRRTEFYYNSQRQLTDTVYPN
GLQSRQEYDIQGRLIADTLRDGSTTRWFYDNPHSEYPSASEDATGSRKQMTWSRYGQLLT
FTDCSGYQTRYEYDRFGQVTALHQEEGLSQYRAYDDRGRLVSQKNAQGHETRYEYSIAGD
LMVVLHPDGSRQTTEYDAAGHPVSTTTGGLTRQMAYDAAGRVTQLTNENGSHTTFAYDVL
DRLVQETGFDGRTQRYQYGITGQLIRSEDESLVTLWHYDASDRLTYRTVNDEEAERWQYN
ERGWLAEVSHLSDGHRVAVQYEYDKQGRMNLERQTVQHPETGELLWQHETRHDYSDKGLP
DRVTPDALPPVAWLTYGSGYLAGMKPGDTPLIDFTRDRLHRETQRRFGEYDLTTAYTPGG
QLQSHHLSILQLNRDYTWNSGGQLVRIRGQHEQRDYQYGDAGRLLGTHITSPHHDLAQWT
FTDPAGNRTAQRDRYPMLPDHFRDNRITQDVENFYHYDEHGRLTEKDERRIRPHGSVVHH
YRYDNQHRLTHYRRMQQGNVLTESRYLYDPPGRRVSKRVWACTVFHDGSCSQPALQETVW
YAWDGDRLTTTQTDKTRIQTVYLPGSFTPLIRIETATGELTRATRRTLAEKFQQEANVTF
PPELVAMVDNLEADLRRGELSEASRTWLAQCGLTPEQMKNQLEPIYIPVRKIHLYHCDHR
GLPLALIDVNGAIAWRAEFDEWGNILREDNPYNLEQLIRLPGQQYDEETGLYYNRHRYYD
PLQGRYITQDPIGLMGGWNLYQYPLDPIQIIDPLGLSGWDGLGNWLSQPGMKEAYNHAAG
EAEGPIAKPISEWEFSEWNVVKGSNHLGTNYINVYAMCKDQFDNTKSVAAKVFQTGLFPL
NEIEAGKGIPDPSENIGSKSAPVNTAADCIENLVKAHSRALTCGSKNGYECFMDTVATPE
LGNKLCGETE
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaaaccggcggcgcgtcagggcgacggcaccatgaagggtggcccgataatc
cagggctctgcgggtgtgatgattggcgcccccaccggtgtggcctgttcggtctgccct
gggggcatgacttccggtaatccagtcaacccgttgctgggtgcaaaggtgctgcccggc
gaaaccgatttcgccctgcccggtccgttaccgtttgtgctctcgaggacttacaacagc
taccggacgaaaacgcctgcaccggtgggtatttttggccccggctggaaagcgcccttc
gatatccgcttacaaatccacgataacgaactgataattaacgataacggcggcagaagc
atccactttgagccgctgtttcccggtgaaacggccttcagccgcagcgaatcgctctgg
ctggcgcggggcggcgtgccggcgctgcatgaaagcaatgtactgcatgtgctgtggcag
gccctgccggaagacattcgcaccagtccacacgtgtatctggcaaccaacagcgttcag
ggaccgtggtggatcctgggctggtctgcgcgcgtaccgggagcggaggaacccttacct
gccccgctgccgccgtaccggacgctgacggctctggtggacaatttagggcggagaatg
gtcttccatcgtgccgctaccggtgatgcagccggggaaatcagcgccgtgacggacggt
gcaggccgccgcttccggctggtgctgaccacgcaggcgcagcgggcagcacagtaccgg
aagcaggtaaccgccagtggcacaaaaccccttcccttcccggatgctctgcccgccacc
gcgtacggcacggacaacggccttcgtctggcagaagtatggctgatccacgacccggaa
tacccggacactctgcccgccgcgccgctggcgcgatacgactattccccgcgtggcgaa
ctggcaacggtatacgaccgcagcggcacggcagtacgccattttacgtatgacccgccg
catccgggacgcatggtggcacaccgttatgcgggcagaccagagatacgctatcgctat
gacatcgccgggcgggtaacggaacagcgtaacccggaaggcttaagctatacctactcg
tatgaacagaaccgcgtcattatcaccgatagtctgaaccgtcgtgaggtgctgcacacc
gaaggcgaaggcgggctgaagcgggtggtcagacaggaacgctccgatggcagcgccatt
cacagtgaatacgacccggcagggagacttattgcacagaccgatgcggcgggccgcaag
acggaataccgcctgagtcccggctccggccagttaaaagaaatcatcgcgccagacggc
aggcgtactgaattttattacaacagccagcgccagttgacggacaccgtatacccgaac
ggcctgcaaagccggcaggaatacgacattcagggcagactcatcgccgacaccctgcgc
gacggcagcaccacccgctggttttatgacaacccgcacagcgaatacccgtctgccagc
gaagacgccaccggcagccggaaacagatgacgtggagccgctacgggcagttgctcacc
ttcaccgactgctccggctaccagacccgttacgaatatgaccgcttcggtcaggtcact
gcccttcatcaggaagaaggcctcagccagtaccgtgcttacgatgaccggggcagactg
gtcagccagaaaaatgcacagggccacgaaacccgctatgagtacagcatcgcgggcgac
ctgatggtcgtgctccacccggacggcagcaggcagaccacagagtatgatgccgctgga
cacccggtgagcaccaccactggcggcctgacccggcagatggcatacgacgccgcaggc
cgtgtgacgcaactgaccaacgaaaacggcagccacaccaccttcgcttatgatgtgctg
gacaggctggtgcaggaaacgggctttgacggcaggacgcagcgttatcagtacggtatt
accgggcagcttatccgcagtgaggacgaaagccttgtcaccctctggcattacgatgcg
tcagaccgcctgacataccgaacggtgaatgacgaagaggcagaacgctggcagtacaac
gagcgtggctggctggccgaagtcagccatctcagcgacggccaccgcgtcgccgtgcag
tatgagtacgataaacagggacggatgaaccttgaacgccagacggtgcagcatcccgaa
acgggagagctgctgtggcagcacgaaacccggcacgattacagcgataagggactgccg
gaccgcgtgacaccggacgcccttcccccggtggcgtggctgacctacggcagcgggtat
ctggccggcatgaagcccggcgacacgccgcttatcgacttcacccgcgaccgcctgcac
cgggagacgcagcgccgcttcggcgaatacgacctgaccacggcatacaccccaggcggt
cagctacagagccatcacctcagcattcttcagcttaaccgcgactacacctggaacagc
ggcggacagctggtccgcatccgcgggcagcatgagcagcgggattatcagtacggcgac
gccgggaggctcctcggtacacatatcacatcgccccaccacgacctggcgcagtggacg
ttcaccgacccggcgggcaaccggacagcgcaacgggatagatacccgatgctgccggac
catttccgggataaccgcatcacccaggatgtggagaatttttaccattatgacgaacac
ggcaggctgacagagaaagacgagcgccggatacgcccgcacggcagcgtcgtgcatcat
taccgctatgataaccagcaccggctgacgcactaccgccggatgcaacagggcaacgtg
ctgacggaaagccgctatctttacgacccgccgggccgccgcgtcagcaaacgggtgtgg
gcatgtacggtatttcacgatggctcgtgttcacagccggcactgcaggaaaccgtgtgg
tacgcctgggatggcgaccggctgaccaccacgcagacggacaaaacccgcatccagacg
gtgtacctgccgggaagcttcacgccgctcatccgtattgaaacggcaaccggagaactg
accagagccacccgccgcacgctggccgagaaatttcagcaggaagcaaacgtgaccttc
ccgccggaactggtggcgatggtggataatctggaagcagatctacggcgcggggaactc
agcgaagccagccggacgtggctggcacagtgcggcctgacgccggagcagatgaaaaat
cagctggagccgatatatataccggtaagaaaaatccacctgtaccactgcgaccaccgg
ggcctgccgctggcactgattgacgttaacggggccattgcgtggcgcgcagagtttgat
gaatgggggaatatcctgcgggaagataacccgtataacctggaacagctcatccgtctg
ccggggcagcagtatgacgaggagacagggctgtactataaccggcaccggtactacgac
ccgttacagggaaggtatatcacgcaggatccgattggattaatgggaggttggaatttg
tatcaatatccgctggatccgatacaaataatagatcctttagggttatctggctgggat
ggattaggcaattggctcagccagccaggtatgaaagaggcttataatcatgcagcaggt
gaagccgaaggtccaattgcaaaacctatatccgaatgggaattttccgaatggaatgtg
gttaaaggaagtaatcatctcgggactaattatataaatgtgtatgcaatgtgtaaggat
caatttgataacacaaagtctgttgctgcaaaagtttttcaaaccggtttgtttccgttg
aatgaaattgaagcagggaaagggatacctgaccctagcgaaaatattggaagtaaatca
gctcctgtaaacaccgctgcagattgcattgagaatctcgtaaaagctcattcaagggca
ttaacgtgcggttcaaaaaatggttatgaatgcttcatggatacagttgcgaccccagag
ttagggaataaattatgcggagagactgagtaa
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