Citrobacter sp. CFNIH10: C2U53_29225
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Entry
C2U53_29225 CDS
T05324
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
cir
Citrobacter sp. CFNIH10
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cir03009
]
C2U53_29225
Enzymes [BR:
cir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C2U53_29225
Ribosome biogenesis [BR:
cir03009
]
Prokaryotic type
rRNA helicases
C2U53_29225
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF561
AAA_22
AAA_30
Shikimate_DH
CMS1
Motif
Other DBs
NCBI-ProteinID:
AUZ67579
UniProt:
A0A3S7DF36
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All DBs
Position
5140533..5141867
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AA seq
444 aa
AA seq
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MTVTTFSELELDESLLDALQEKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKNTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEEPVEVSATPSTRERKKIHQWYYRADNVEHKFELLK
HLLKQDDATRTIVFVRKRERVHELAEKLRLAGINNCYLEGEMAQIKRNEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
LKIGRYIEEPLKSRVIDELRPTSRAPSEKMTGKPSKKALAKREEKKKEKDKEKPRVKKRH
RDTRNIGKRRKPSAATTPQESNEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctggatgccctccag
gaaaaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcactcgaa
ggccgtgacgtactcggttctgcgccgacaggcaccggtaaaacggcggcgtatttgctg
ccagcgttgcagcacctgctcgacttcccgcgtaaaaaatccggtccgccacgtattttg
atcctgactccgactcgcgaactggcgatgcaggtcgccgatcatgcccgtgaactggcc
aaaaacacccatctggatatcgcgacaattaccggcggcgtagcctacatgaaccacgcc
gaagtgttcagcgaaaaccaggatatcgtggtcgccaccaccgggcgtctgctgcagtat
attaaagaagagaattttgactgccgcgccgtcgaaacgctgatcctcgacgaagccgac
cgaatgctggatatgggctttgcccaggacatcgagcacatcgccggggaaacgcgctgg
cgcaaacagacgatgctgttctccgccacgctggaaggcgatgcgattaaagattttgcc
gaacgtctgctggaagagccagtcgaagtctccgctacgccatccacccgcgaacgtaag
aagatccaccagtggtattaccgcgcggataacgtcgaacataaattcgaactgctgaag
cacctgctgaagcaagacgacgccacccgtaccattgtgtttgtccgcaagcgcgagcgc
gtgcacgaactggctgaaaagctgcgtctggcggggatcaacaactgctatctcgaaggt
gagatggcgcagatcaagcgtaacgaaggcattaagcgtcttactgacggtcgcgttaac
gtgctggtcgccaccgatgttgccgcacgcgggatcgatattcctgacgtcagccacgtg
attaacttcgacatgccgcgtagcggagacacctatctgcaccgcattggccgtaccggc
cgcgccggtcgcaagggcaccgcaatctcgctggtcgaagcgcacgatcacctgctgctg
ctgaaaattggtcgctacattgaagaaccgctgaaatccagggtgattgatgagttgcgc
ccaacctcacgcgctccgagcgaaaagatgacgggcaaaccgtcgaaaaaagcactcgcg
aaacgtgaagagaagaaaaaagagaaagacaaagagaaaccacgcgtgaagaaacgccat
cgcgataccaggaacattggtaaacgtcgtaagccgagtgcggcaacgacgccgcaggag
tcaaatgaagagtaa
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