Cellulomonas iranensis: LFM56_03170
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Entry
LFM56_03170 CDS
T07886
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cira
Cellulomonas iranensis
Pathway
cira03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cira00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LFM56_03170 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cira03019
]
LFM56_03170 (recQ)
03400 DNA repair and recombination proteins [BR:
cira03400
]
LFM56_03170 (recQ)
Enzymes [BR:
cira01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LFM56_03170 (recQ)
Messenger RNA biogenesis [BR:
cira03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LFM56_03170 (recQ)
DNA repair and recombination proteins [BR:
cira03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LFM56_03170 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
AAA_33
HHH
Motif
Other DBs
NCBI-ProteinID:
UCN16443
LinkDB
All DBs
Position
complement(730799..732601)
Genome browser
AA seq
600 aa
AA seq
DB search
MLHRVWGYDAFRGDQAAVVDTVVAGGDAVVLMPTGGGKSLCYQVPALVREGTGVVVSPLI
ALMQDQVDALSALGVRAGFLNSTQERDQRRAVEDAFLAGELDLLYLAPERLRVPETLDLL
DRGHVALFAIDEAHCVSQWGHDFRPDYLALSLLHERWPGVPRVALTATATRATHREICER
LQLTDAAQFVASFDRPNIRYRIVPKDNPRAQLLHLLRTEHEGDSGIVYCLSRASVEQTAA
ALVDAGVHALPYHAGLDRRVRAENQSRFLRDDGVVMVATIAFGMGIDKPDVRFVAHLDLP
KSVEGYYQETGRAGRDGLPSTAWLAYGLADVVQQRRMIDTSEGDAAHRRRLTQHLDAMLA
LCETVDCRRVQLLAYFGQESDGPCGNCDTCLEPPQSWDGTVPAQKLLSTVVRLDQRGQRY
GVGHLVDILRGKATPRVQQLGHDALSTFGIGQDLSDGEWRGVVRQLLAAELLAVDTDGYG
TIRLTEASAAVLRGEREVRLRREPERTGRTSRGSRGGRPAAAADLDADAAALFEALRAWR
AAAAKEQGVPAYVVFHDATLREIATRRPASRDELGTISGVGAAKLDRYAEGVLAALAGDA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcaccgcgtgtgggggtacgacgcgttccgcggcgaccaggccgcggtcgtcgac
accgtggtcgccggcggggacgcggtggtcctcatgcccaccggcggcggcaagtcgctg
tgctaccaggtgcccgcgctcgtgcgcgagggcacgggcgtcgtcgtgtcgccgctcatc
gcgctcatgcaggaccaggtggacgcgctgtcggcgctcggcgtgcgcgcggggttcctc
aactcgacgcaggagcgcgaccagcgccgcgcggtcgaggacgcgttcctcgcgggcgag
ctcgacctgctgtacctcgcgcccgagcgactgcgcgtgcccgagacgctcgacctgctg
gaccgcggccacgtcgcgctgttcgcgatcgacgaggcgcactgcgtgtcgcagtggggg
cacgacttccggcccgactacctcgcactgtcgctgctgcacgagcggtggcccggcgtg
ccgcgcgtcgcgctcaccgcgaccgcgacgcgtgcgacgcaccgcgagatctgcgagcgc
ctgcagctcaccgacgcggcgcagttcgtcgcgagcttcgaccggcccaacatccgctac
cggatcgtgccgaaggacaacccgcgcgcgcagctgctgcacctgctgcgcaccgagcac
gagggcgactcgggcatcgtctactgcctgtcgcgtgcgtcggtcgagcagaccgcggcc
gcgctggtcgacgcgggcgtgcacgcgctgccgtaccacgcgggcctcgaccgccgcgtg
cgcgccgagaaccagtcgcggttcctgcgcgacgacggcgtcgtcatggtcgcgaccatc
gcgttcggcatgggcatcgacaagccggacgtgcggttcgtcgcgcacctcgacctgccc
aagtcggtcgagggctactaccaggagacggggcgcgcgggacgcgacggcctgccgtcg
accgcgtggctcgcgtacgggctcgcggacgtcgtgcagcagcgccgcatgatcgacacg
tccgagggcgacgcggcccaccggcggcgcctcacgcagcacctcgacgcgatgctcgcg
ctgtgcgagacggtcgactgccgccgcgtgcagctgctcgcgtacttcgggcaggagtcc
gacgggccgtgcggcaactgcgacacgtgcctggagccgccgcagtcgtgggacggcacg
gtcccggcgcagaagctgctgtcgacggtcgtgcggctcgaccagcgggggcagcgctac
ggcgtcgggcacctcgtggacatcctgcgcggcaaggcgacgccgcgcgtgcagcagctc
gggcacgacgcgctgtcgacgttcggcatcgggcaggacctgtcggacggcgagtggcgc
ggcgtcgtgcgtcagctgctcgcggccgagctgctcgcggtcgacaccgacggctacggc
acgatccggctcaccgaggcgtccgccgcggtgctgcgcggcgagcgcgaggtccggctg
cgccgcgagcccgagcgcaccgggcgcacgtcgcgcggctcgcgcgggggacgcccggcg
gcggccgccgacctcgacgcggacgccgcggcgctgttcgaggcgctgcgcgcgtggcgc
gccgccgccgcgaaggagcagggcgtgcccgcgtacgtcgtgttccacgacgcgacgctc
cgcgagatcgcgacgcggcggccggccagccgtgacgagctcggcacgatcagcggcgtc
ggtgcggccaagctcgaccggtacgccgagggcgtgctcgcggcgctcgcgggcgacgcc
tga
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