Cellulomonas iranensis: LFM56_04875
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Entry
LFM56_04875 CDS
T07886
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cira
Cellulomonas iranensis
Pathway
cira03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cira00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LFM56_04875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cira03021
]
LFM56_04875
03400 DNA repair and recombination proteins [BR:
cira03400
]
LFM56_04875
Enzymes [BR:
cira01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LFM56_04875
Transcription machinery [BR:
cira03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LFM56_04875
DNA repair and recombination proteins [BR:
cira03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LFM56_04875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UCN15654
LinkDB
All DBs
Position
1083396..1084409
Genome browser
AA seq
337 aa
AA seq
DB search
MLIAQRPTLTEEVISEHRSRFSIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVPGVKEDVTEIILNIKNLVVSSENDEPVVMYLRKQGAGDVTGADIVPPAGVEVHN
PELHLATLNEKGKLEIELTVERGRGYVSANQNKSFDAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKPAISPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPTD
AALAADLALPIEDLQLTIRSYNCLKREGIHTVGELVARSEADLLDIRNFGAKSITEVKEK
LAELGLTLKDSPLDFDPTAAGAYYGDDETDFVEDEQY
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatcgcacagcgccccaccctgaccgaagaggtcatctcggagcaccgctcgcgg
ttctccatcgagcctctcgagcccggcttcggctacacgctcggcaactccctgcgccgg
acgctgctgtcgtccatcccgggggccgccgtcacctccatccggatcgacggcgtgctg
cacgagttctcgacggtcccgggcgtcaaggaggacgtcaccgagatcatcctcaacatc
aagaacctcgtcgtctcctcggagaacgacgagccggtcgtgatgtacctgcgcaagcag
ggtgcgggtgacgtcaccggtgcggacatcgtcccgcccgcgggtgtcgaggtccacaac
cccgagctgcacctggcgacgctcaacgagaagggcaagctcgagatcgagctgaccgtc
gagcgcggccgcggctacgtctcggcgaaccagaacaagtcgttcgacgccgagatcggc
cggatcccggtcgactcgatctactcgcctgtcctcaaggtgacctacaaggtcgaggcg
acgcgtgtcgagcagcgcacggacttcgacaagctcatcgtcgacgtcgagaccaagccg
gcgatcagcccgcgcgacgccctggcgtcggccggcaagacgctcgtcgagctgttcggc
ctggcgcgcgagctcaacgtcgaggccgagggcatcgagatcggcccgtcgccgacggac
gccgcgctcgccgccgacctcgcgctgccgatcgaggacctgcagctgacgatccggtcg
tacaactgcctcaagcgcgagggcatccacacggtgggcgagctcgtggcgcggtccgag
gcggacctgctggacatccgcaacttcggtgcgaagtcgatcaccgaggtcaaggagaag
ctggccgagctgggcctcacgctcaaggacagcccgctggacttcgaccccacggccgcc
ggcgcctactacggggacgacgagaccgacttcgtcgaggacgagcagtactga
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