Cellulomonas iranensis: LFM56_05830
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Entry
LFM56_05830 CDS
T07886
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cira
Cellulomonas iranensis
Pathway
cira03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cira00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LFM56_05830 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cira03400
]
LFM56_05830 (recC)
Enzymes [BR:
cira01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LFM56_05830 (recC)
DNA repair and recombination proteins [BR:
cira03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LFM56_05830 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Ribosomal_L18A
Motif
Other DBs
NCBI-ProteinID:
UCN15832
LinkDB
All DBs
Position
complement(1297526..1300960)
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AA seq
1144 aa
AA seq
DB search
MTAGFDGAGGRGRLRVHTSPRADVLVDALADVLADVPPGTDPFAREVVAVPTRGVERWVA
QRLSHRLGAGPDGEAGVCARIDFDPPARLVRDAVAAATGTARDDDPWEPERLVWHVLRAV
DAAVAAGEAWAHPLARHVTDEPGARDAVRRGRRVRLAQRLAGAFTAYAAQRPSLVTAWAA
GDDEDGAGAPLPADLAWQAPLWRAVRAELGVASPAERLADAVRALTADPDVVDLPRRLSV
LGPTRLSRAHVDVLAALAVHRDVHVWLPHPSDALWRRAARGVEPAAPAAPAPRRRDVPAV
AVHPLLASTARDATELGARLAAAGADVTHHAAPAPPPTVLGAVQAALRADERPAVPAAAA
PGDRSVQVHACHGRGRQVEVLREVVLGLLADDPTLQPRDVVVLCPDVEAFAPLVAAAFGT
AAGVDAPDVGGADHGTHPGRTLRVRLADRAPARTNPLLRVLSDLLALAGSRVTASAVVDL
AGLPAVRRRFGFDDAAVERLRAWALESGARWGEDQARRARYGLGAVAQGTWRTATDRLLL
GVAMAEEDHRFVGSALPLDDVDSTDVDLAGRFAELVDRVTDLLAGLDGERPASAWLATLE
RALVLLTAADPDDAWQEVGARAVLGDVRASAAGTDVPLRLADVVALLEPRLAGRPTRAGF
RTGALTVCSLEPMRAVPHRVVCLLGLDDGAFPRAGTPDGDDVLARDPLVGERDRRTEDRQ
LFLDAVTAAGEHLVVVHSGADERTGAPRPPAVPVGELLDAVDEAVALPGGARAALVVHHP
LQTVDERSFTPGALGRPGPFSFDDVDRRAALVARGPRHVRPPLLTAPLPPLDQPAVELDD
LAAVLEHPVKAFVRRRLGVVVPGEADDLDDRLPLTLGPLDEWATGDRLLTAVLDGVDLAR
AAAAERRRGRVPPGQLGGAVLQDVATRAGVVAEAVVPLLGAPATAVDVTVHLPGGRTLTG
TVPGLRGDVLVRAVYSRLGAKHRLRAWLHLLALVASPGAPAVRGAATVGRGPGRRPSAAT
SWLRAPGHDDARRVLGDLLALHDRALRAPLPLPVAAGGTYAQRRHGHDDPAGALADAEHT
LRARFEHTDEHHVLAWGDGFTLLQVAGDPTPADRAAWPDEPTLLGALARTAWDALLEHEG
QVPW
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcggggttcgacggggcgggcgggcggggccggctgcgcgtgcacacctcaccg
cgtgccgacgtgctggtcgacgcgctcgccgacgtcctggccgacgtgccgcccggcacc
gacccgttcgcgcgcgaggtcgtcgcggtgccgacccggggcgtcgagcggtgggtcgcg
cagcggctgtcgcaccgcctgggcgcgggccctgacggcgaggccggcgtgtgcgcgcgc
atcgacttcgacccgcccgcgcggctcgtgcgcgacgcggtcgccgcggccacgggcacc
gcgcgcgacgacgacccgtgggagcccgagcggctcgtgtggcacgtgctgcgcgcggtc
gacgcggccgtcgcggcgggcgaggcctgggcgcacccgctggcccgccacgtcaccgac
gagccgggcgcgcgcgacgccgtgcggcggggccgccgggtgcggctcgcgcagcgtctc
gcgggcgcgttcacggcgtacgccgcgcagcgcccgtcgctcgtgacggcgtgggcggcg
ggcgacgacgaggacggtgcgggcgcgccgctgccggccgacctggcgtggcaggcgccg
ctgtggcgcgcggtgcgcgccgagctgggcgtggcgagcccggccgaacgactcgcggac
gccgtgcgcgcgctgaccgccgaccccgacgtcgtggacctgccccggcggctgtcggtg
ctcgggccgacgcggctgtcgcgcgcgcacgtcgacgtgctcgcggcgctcgcggtgcac
cgcgacgtgcacgtgtggctgccgcacccgtcggacgcgctgtggcgccgcgcggcccgc
ggggtcgagcccgccgcacccgcggcgcccgcgccgcggcgccgcgacgtgcccgctgtc
gcggtgcacccgctgctcgcgtcgaccgcgcgcgacgcgaccgagctcggcgcgcgcctg
gccgccgcgggcgccgacgtgacgcaccacgccgcgcccgctcccccgccgaccgtgctc
ggcgcggtgcaggccgcgctgcgcgccgacgagcggccggccgtgcccgccgccgcggcg
ccgggcgaccggagcgtgcaggtgcacgcgtgccacgggcgcggacggcaggtcgaggtg
ctgcgcgaggtcgtgctcgggctgctcgcggacgacccgacgctgcagccgcgcgacgtc
gtcgtgctgtgccccgacgtcgaggcgttcgccccgctggtcgcggccgcgttcggcacc
gcggcgggcgtcgacgccccggacgtcggcggcgcggaccacggcacccacccgggccgc
acgctgcgcgtccggctcgccgaccgcgcgcccgcgcgcaccaacccgctgctgcgcgtg
ctgtccgacctgctcgcgctcgcgggctcgcgcgtcacggcctccgcggtggtcgacctc
gcgggcctgcccgcggtgcggcgacggttcgggttcgacgacgccgccgtcgagcggctg
cgcgcgtgggcgctcgagtccggcgcccggtggggcgaggaccaggcgcggcgcgcgcgg
tacgggctgggcgcggtcgcgcagggcacgtggcgcaccgcgaccgaccggctgctgctg
ggggtcgcgatggccgaggaggaccaccgcttcgtcgggtcggcgctgccgctcgacgac
gtcgactcgaccgacgtcgacctcgcgggccggttcgccgagctcgtcgaccgggtcacc
gacctgctggccgggctcgacggcgagcggcccgcgagcgcgtggctcgcgacgctcgag
cgcgcgctcgtgctgctgaccgccgccgaccccgacgacgcgtggcaggaggtcggcgcg
cgggccgtgctcggcgacgtgcgcgcgtcggccgcgggcaccgacgtgccgttgcggctc
gccgacgtcgtcgcgctgctcgagccgcgcctcgcgggccggcccacgcgcgccgggttc
cgcacgggtgcgctcacggtgtgctcgctcgagccgatgcgcgcggtgccgcaccgcgtg
gtgtgcctgctgggtctcgacgacggcgcgttcccgcgggcgggcacgcccgacggcgac
gacgtgctcgcgcgcgacccgctggtcggcgagcgcgaccgccgcaccgaggaccggcag
ctgttcctcgacgcggtgaccgccgcgggcgagcacctcgtggtcgtgcacagcggggcc
gacgagcgcaccggggcgccgcgcccgccggccgtgcccgtgggcgagctgctcgacgcg
gtcgacgaggcggtcgccctgcccggcggggcgcgggccgcgctcgtcgtgcaccacccg
ctgcagaccgtcgacgagcgcagcttcacgcccggcgcgctgggccgcccggggccgttc
agcttcgacgacgtcgaccggcgcgcggcgctcgtcgcgcgcgggccgcggcacgtgcgc
ccgccgctgctgaccgcaccgctgccgccgctcgaccagcccgcggtcgagctcgacgac
ctggccgcggtgctcgagcaccccgtcaaggcgttcgtgcgccgccgcctgggcgtcgtg
gtcccgggcgaggccgacgacctcgacgaccggctgccgctcacgctgggaccgctcgac
gagtgggcgacgggcgaccggctgctcacggcggtgctcgacggcgtggacctcgcgcgc
gcggccgcggccgagcgtcggcgcggccgcgtgccgccggggcagctgggcggtgccgtg
ctgcaggacgtcgcgacgcgcgcgggcgtggtcgcggaggccgtggtgccgctgctgggc
gccccggcgacggcggtcgacgtgaccgtccacctgccgggcggccgcaccctcacgggc
acggtgccggggctgcgcggcgacgtcctggtgcgcgcggtctactcgcggctcggcgcg
aagcaccggctgcgcgcgtggctgcacctgctggccctcgtggcgtcgcccggcgccccg
gccgtgcggggcgccgcgaccgtgggccggggcccgggccgccgcccgtcggccgcgacg
tcgtggctgcgcgcacccggccatgacgacgcacgacgcgtgctgggcgacctgctcgcg
ctgcacgaccgcgcgctgcgcgcgccgctgccgctgcccgtggccgccggcggcacgtac
gcgcagcgccgccacgggcacgacgacccggcgggtgcgctcgcggacgccgagcacacc
ctgcgtgcgcggttcgagcacaccgacgagcaccacgtgctcgcgtggggcgacgggttc
acgctgctgcaggtcgcgggcgacccgacgcccgcggaccgcgccgcgtggcccgacgag
ccgacgctgctgggtgcgctcgcgcgcacggcgtgggacgcgctgctcgagcacgagggg
caggtgccgtggtga
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