Cellulomonas iranensis: LFM56_06635
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Entry
LFM56_06635 CDS
T07886
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cira
Cellulomonas iranensis
Pathway
cira03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cira00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LFM56_06635 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cira03400
]
LFM56_06635 (mutM)
Enzymes [BR:
cira01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LFM56_06635 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LFM56_06635 (mutM)
DNA repair and recombination proteins [BR:
cira03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LFM56_06635 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF7573
Motif
Other DBs
NCBI-ProteinID:
UCN15984
LinkDB
All DBs
Position
1476864..1477829
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AA seq
321 aa
AA seq
DB search
MPELPEVETVRDGLARHVLGRTVEAVRVHRDYSVRRHDGGPSDFAARLTGRRFEAAVRRG
KFLWLLLDEGAGRGDDALLAHLGMSGQLLVRGPAADAGEGAAADPVAAPGPHGWVDHPHL
RVRFELDDGSALDFVDQRTFGHLAVPDLVATPDGAPGGLGSDRAVVPLPVAHIARDLLDP
ALDRPALVDAVRSRRTELKRALLDQTLVSGVGNIYADEALWRARLHGARPTATARRADVG
RLLDAAAEVMREALAQGGTSFDALYVNVNGASGYFDRSLAVYGQEGRPCRRCGTPVRRDA
FANRSSFTCPVCQPRPRARRT
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctccccgaggtcgagaccgtccgtgacggtctggcccgccacgtcctgggc
cgcacggtcgaggccgtccgcgtgcaccgcgactactcggtgcgccgtcacgacgggggt
ccgtccgacttcgccgcccggctgacggggcgccggttcgaggccgccgtgcggcgcggc
aagttcctgtggctgctgctcgacgagggtgcgggccgcggcgacgacgcgctgctggcg
cacctcggcatgagcgggcagctgctggtgcgcgggccggcggcggacgccggcgagggc
gccgccgcggacccggtcgcggcaccggggccgcacggctgggtcgaccacccgcacctg
cgcgtgcggttcgagctcgacgacggctcggcgctcgacttcgtcgaccagcggacgttc
ggccacctcgccgtgccggacctcgtcgcgacgccggacggcgcccccggcgggctcggg
tccgaccgcgcggtcgtgccgctgcccgtcgcgcacatcgcgcgcgacctgctggacccc
gcgctcgaccgccccgcgctcgtcgacgccgtgcggtcgcgccgaaccgagctcaagcgc
gcgctgctcgaccagacgctcgtgtcgggcgtcggcaacatctacgccgacgaggcgctg
tggcgcgcgcggctgcacggtgcccgccccacggccacggcccgccgtgcggacgtcgga
cgcctgctcgacgccgccgccgaggtcatgcgcgaggcgctcgcgcagggcggcacgagc
ttcgacgcgctctacgtcaacgtcaacggggcctcggggtacttcgaccgctccctggcc
gtctacggccaggagggccgcccgtgccggcgctgcggcacgcccgtgcgccgcgacgcg
ttcgccaaccggtcgtcgttcacgtgcccggtgtgccagccgcggccgcgcgcacgtcgc
acctga
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